LOCUS AK095881 3048 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38562 fis, clone HCHON2004002, highly similar
to Apolipoprotein-L6.
ACCESSION AK095881
VERSION AK095881.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3048
/cell_type="chondrocytes (HC)"
/clone="HCHON2004002"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000020736"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 257..1288
/codon_start=1
/note="highly similar to Apolipoprotein-L6"
/protein_id="BAG53156.1"
/translation="MDNQAERESEAGVGLQRDEDDAPLCEDVELQDGDLSPEEKIFLR
EFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLALAPAT
GGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDREDEEEK
ADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLTTGQVSSRSRVQV
QKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTKFAEELRAKAL
ELERKLTELTQLYKSLQQKVRSRARGVGKDLTGTCETEAYWKELREHVWMWLWLCVCL
CVCVYVQFT"
BASE COUNT 831 a 717 c 791 g 709 t
ORIGIN
1 tttttctctc ctgcagcact taaccgaaac cagttttgca atcaattcct gttcaaaggc
61 caccctactc ttcctatccg tctttctcca gcccagacac tcacagcccc ctgccagacc
121 aggggacctc ggagaggcaa ggacagaggt tcaggatctt cctctccctc gggacccaag
181 gccacaaagg agagctccgt ggagagaaga aaatcatttg actcctgggg acacagattt
241 gctgccacag aggctgatgg acaaccaggc ggagagagaa agtgaggctg gtgttggttt
301 gcaaagggat gaggatgacg ctcctctgtg tgaagacgtg gagctacaag acggagatct
361 gtcccccgaa gaaaaaatat ttttgagaga atttcccaga ttgaaagaag atctgaaagg
421 gaacattgac aagctccgtg ccctcgcaga cgatattgac aaaacccaca agaaattcac
481 caaggctaac atggtggcca cctctactgc tgtcatctct ggagtgatga gcctcctggg
541 tttagccctt gccccagcaa caggaggagg aagcctgctg ctctccaccg ctggtcaagg
601 tttggcaaca gcagctgggg tcaccagcat cgtgagtggt acgttggaac gctccaaaaa
661 taaagaagcc caagcacggg cggaagacat actgcccacc tacgaccaag aggacaggga
721 ggatgaggaa gagaaggcag actatgtcac agctgctgga aagattatct ataatcttag
781 aaacaccttg aagtatgcca agaaaaacgt ccgtgcattt tggaaactca gagccaaccc
841 acgcttggcc aatgctacca agcgtcttct gaccactggc caagtctcct cccggagccg
901 cgtgcaggtg caaaaggcct ttgcgggaac aacactggcg atgaccaaaa atgctcgcgt
961 gctgggaggt gtgatgtccg ccttctccct tggctatgac ttggccactc tctcaaagga
1021 atggaagcac ctgaaggaag gagcaaggac aaagtttgcg gaagagttga gagccaaggc
1081 cttggagctg gagaggaaac tcacagaact cacccagctc tacaagagct tgcagcagaa
1141 agtgaggtca agggccagag gggtggggaa ggatttaact gggacctgcg aaaccgaggc
1201 ttactggaag gagttaaggg agcatgtgtg gatgtggctg tggctgtgtg tgtgtctgtg
1261 tgtctgtgtg tatgtacagt ttacatgaat gttcctcagg acatggcata caatggcctt
1321 ggaggtccaa ataatatcaa gtacatcttg gagatgaggg tgcctgtcct ggacagacct
1381 cggcatgcct tctgtttctc cttcaatgct ccttaaggcc tatgtgctgg gaaaagggtc
1441 ttccctgttt gtttgtttgt ttgtttgttt gtttgttttg agacagggtc tctgttgccc
1501 aggctggagt gcagtggcgt aatctcggct cactgcaacc tctgcctcct gagtgcaagc
1561 aagtctcctg cctcagcctc ccaagtagct gggattacag gcacgcacca ccacgcccag
1621 ctaattttgg tatttttttg tagagacagg gtttcaccat tttggccagg ctggtctcga
1681 attcctgacc tcaagtgatc cacccacctt ggcctcccaa aatgctggga ttacaagcgt
1741 gagctaccct gcccagccgg gtcttcccag ttttaacaaa gaggtcacag agccacaggc
1801 ggagttagga actaaattgt ctcctcctcc caattcatat gttgaagtcc taaaccaaaa
1861 tgtggctgta tttagagatg gaccctttgg gaggtaatta gggttgactg aggccatagg
1921 gtgaggtcct aacccgatgg aattgacttc tttataagag gaggaggaaa tacaagaggg
1981 cctccccacc cctgctgcac acctacactg aaggaaggct atttgcagat gcagcaagaa
2041 ggcagccatc tgcaaggcag aagaagagag ccctcaccag gaactgaata agtcagtcag
2101 tctgggactt ccagcctcta gaactgtgaa acaataaatt tctgtggtgt aagcaactca
2161 atctatagta gtttgttact attttgttat agcaaccaaa gatgactaag ccagacaggt
2221 tatgtcactc gccaagtgtc ttagtctgtt tgtgctgcta taacaaaata ccttagactg
2281 ggtaatttac aaacaacaga gatgtatcca gagatccaca gttctggagg ctgagaagtc
2341 taaaatcaag gcaccagcag attccacatc tcgtgaaggc tcactctctg cttcacagat
2401 ggcactgtct tgctgtgttc tcacatggca gaaggggcaa acaagccccc ctgggcctct
2461 tttataaagg cactaactct atgcctaaag gcagggccct catgactcta tcacctacca
2521 aaaggctcca cttctttata ctattggagg ggtgaaggaa cttcctttct agaccttgaa
2581 ggtttaagaa tttgaatcta taaaacaagc tgacaataga cagattaaca ggagaaaaag
2641 catatacatt ttttaatgtg ggccagatgg cagaagctta aataacaccc caagctacag
2701 gaagtgaggc ctctgatggg gaggtagtga cacaggctgt gggagggggt agggggagga
2761 agtctgtggt gagcaaagtt tgccttatta cactgataaa gtgtaattac actaataaag
2821 ctggatcacc tgaggttagg agtttgagaa cagcctggcc aacatggcaa aaccctgtct
2881 ctactataaa tacaaaaatt agccaggtgt agtggcaggg cacttgtaat cctatctact
2941 cgggaggctg aggcaggaga atcgcttgaa cccaggctgt aaaggttgca gtgagccaag
3001 atcatgccac tgcactccag tctgggtgtc agaatgagac cccatctc
//