LOCUS AK095838 2930 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ38519 fis, clone HCHON2000751, moderately
similar to Rab6 GTPase activating protein.
ACCESSION AK095838
VERSION AK095838.2
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2930)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2930
/cell_type="chondrocytes (HC)"
/clone="HCHON2000751"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000020693"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 175..2622
/codon_start=1
/protein_id="BAC04635.1"
/translation="MEVRASLQKVSGSSDSVATMNSEEFVLVPQYADDNSTKHEEKPQ
LKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSLQ
LILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKS
SSQYPFPVTLYVPNVPEGSVRIIDQSSNVEIASFPIYKVLFCARGHDGTTESNCFAFT
ESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTF
SVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIERKVVITVQQLSNKELAIERCFGML
LSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNPNAPVFLALNEETPKDKQVYMT
VAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNA
GDAIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSKDCPEK
ILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYRI
LITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQS
FLAAVLLLHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLH
SHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSK
EDLLQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEKEYQTMRE
SQLQQEDPMDRYKFVYL"
BASE COUNT 904 a 549 c 712 g 765 t
ORIGIN
1 ctcagttccc tccgccctcc tcgggcacca gcggtggcgg agcgaacggg accggcccgg
61 cttcagagcg cgaggtggag ggtggaacgc gggcgcctga aggagttgtt gtctcggcag
121 cgcccgcgga gacgtgaaga ggtggttgtg ggaagagaag tttgcagaac tgaaatggag
181 gtcagagctt cattacagaa ggttagtgga tcatctgatt ctgtggctac aatgaacagt
241 gaagaatttg ttttggttcc tcagtatgca gatgataatt ctacaaaaca tgaagaaaaa
301 cctcaactga agatagtttc taatggtgat gaacaattgg aaaaagccat ggaagagatt
361 ttgagagatt ccgagaaaag gccaagcagt cttcttgttg attgtcaaag ttccagtgag
421 atttcagacc attcgtttgg agatattcca gccagccaaa caaataagcc atctcttcag
481 ttaattttgg atccgtctaa cacagaaatt tctacaccca gaccatcttc tccaggtgga
541 ctacctgaag aagatagtgt tttatttaat aaactgacct acttaggatg tatgaaggtt
601 tcttccccac gtaatgaagt agaggcttta cgggcaatgg caaccatgaa atcttccagt
661 caatacccct ttcctgttac cctgtatgta ccaaatgttc cagaaggttc tgtgagaatt
721 atagaccaat ccagcaatgt ggagatagca tcttttccaa tctataaggt gttattctgt
781 gcacgtggac atgacggaac aacagagagc aattgctttg catttacaga gagttcccat
841 ggttcggaag aatttcagat acatgttttc tcctgtgaaa ttaaagaggc agtaagcaga
901 attttgtaca gtttctgtac agcattcaaa cgttcttcca gacaagtgtc tgatgttaaa
961 gactcagtta ttcctacccc cgacagtgat gtgtttacct tcagtgtctc cttggaggta
1021 aaagaagacg atggaaaagg aaactttagc cctgtgccta aggatagaga taaattttat
1081 ttcaaattaa agcaaggaat agagaggaag gttgtgatta cagtgcagca actttctaac
1141 aaagaattag ctattgaaag atgttttgga atgttattaa gcccaggtcg aaacgtgaag
1201 aacagtgaca tgcatttact ggatatggaa tccatgggaa agagctatga tgggagagct
1261 tatgtcatca ctggcatgtg gaaccccaat gcaccagtat ttctggcact taacgaggaa
1321 accccaaaag ataagcaagt atacatgact gtggcagtgg atatggtagt cacagaggtg
1381 gtggagcctg ttcgctttct cctggagaca gtagtccgtg tgtaccctgc aaatgagcga
1441 ttttggtatt tcagcagaaa gactttcaca gagactttct tcatgagatt gaaacagtct
1501 gagggaaaag gccataccaa tgctggagat gcaatatatg aggtggtgag tctacagcga
1561 gagtctgaca aggaggaacc agtcactcct actagtggag ggggtccaat gtcaccccag
1621 gatgatgaag cagaagagga gagtgataat gaactctcaa gtggaacagg tgatgtgtct
1681 aaggattgtc ctgagaagat cctgtattct tggggagagt tgctaggaaa atggcacagt
1741 aaccttggtg cacgaccgaa agggctgtct actctggtga agagtggtgt ccctgaagca
1801 ttgagggcag aggtatggca gttattggca ggctgccatg acaaccaggc aatgctggat
1861 agataccgaa ttcttatcac aaaggactca gcccaggaga gtgttattac tcgagatatt
1921 catcgtacat ttcccgcaca tgattacttt aaagatactg gaggagatgg tcaagaatcg
1981 ctctataaga tctgcaaggc ctactctgtg tatgatgaag acattgggta ctgtcaaggg
2041 cagtcttttc ttgctgctgt attactgctg catatgccag aggaacaagc attctgtgtt
2101 ttggtgaaaa tcatgtacga ctatggtttg agagacctct acagaaacaa cttcgaagat
2161 cttcattgca aattctacca gttggagaga ctaatgcagg aacagctacc ggacctgcat
2221 agccattttt ctgatctgaa cctggaagct catatgtatg catcccagtg gtttctcact
2281 ctttttactg ccaagttccc actctgcatg gtgttccaca tcattgactt actgctttgt
2341 gagggtttga acataatctt tcatgtagct ttggctctcc taaagacctc aaaggaagac
2401 cttctgcagg ctgattttga aggtgcttta aagttcttta gagttcagct tccaaagaga
2461 tacagggcag aggaaaatgc aagaagactg atggagcagg cttgcaatat taaagtacca
2521 accaagaagc tgaagaaata tgagaaagaa tatcagacaa tgcgagagag tcagctgcaa
2581 caggaagacc caatggatag atacaagttt gtatatttgt aggtaactcc agctgttgca
2641 tttatactgg gaatcttcat aagaagctga gagaaagaga ggggaaaaag aaagtggctt
2701 tctactttca aaaatgaaac aaaaaggaaa aatggcaaag tactgtttta gctgtgcatg
2761 tcatatccac aaagactttt agcaggtgaa ctgttccaag actgacacaa ggatgtttca
2821 aacttgcctc tgtctgtaga aaatgttaaa aataccaact cacttggaag gaaaaataaa
2881 aatcacaaag gtatattgaa aaaaaaaaaa aaaaaaggcc acatgtgctc
//