LOCUS AK095744 2868 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38425 fis, clone FEBRA2012397, highly similar
to Very low-density lipoprotein receptor precursor.
ACCESSION AK095744
VERSION AK095744.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2868)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2868
/clone="FEBRA2012397"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000020599"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 775..2034
/codon_start=1
/note="highly similar to Very low-density lipoprotein
receptor precursor"
/protein_id="BAG53118.1"
/translation="MDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRN
TVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIY
WTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGM
NGFDRRPLVTADIQWPNGITLGLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFL
AHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSG
KNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPSGYNVEENGRDCQRINVTTAVSE
VSVPPKGTSAAWAILPLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLS
IDIGRHSASVGHTYPAISVVSTDDDLA"
BASE COUNT 825 a 612 c 659 g 772 t
ORIGIN
1 aatctccagg aactttgtat gcaatggcca ggatgactgc agcgatggca gtgatgagct
61 ggactgtgcc ccgccaacct gtggcgccca tgagttccag tgcagcacct cctcctgcat
121 ccccatcagc tgggtatgcg acgatgatgc agactgctcc gaccaatctg atgagtccct
181 ggagcagtgt ggccgtcagc cagtcataca caccaagtgt ccagccagcg aaatccagtg
241 cagcacctcc tcctgcatcc ccatcagctg ggtatgcgac gatgatgcag actgctccga
301 ccaatctgat gagtccctgg agcagtgtgg ccgtcagcca gtcatacaca ccaagtgtcc
361 agctgcatcc atggcagcag gcagtgtaat ggtatccgag actgtgtcga tggttccgat
421 gaagtcaact gcaaaaatgt caatcagtgc ttgggccctg gaaaattcaa gtgcagaagt
481 ggagaatgca tagatatcag caaagtatgt aaccaggagc aggactgcag ggactggagt
541 gatgagcccc tgaaagagtg tcatataaac gaatgcttgg taaataatgg tggatgttct
601 catatctgca aagacctagt tataggctac gagtgtgact gtgcagctgg gtttgaactg
661 atagatagga aaacctgtgg agatattgat gaatgccaaa atccaggaat ctgcagtcaa
721 atttgtatca acttaaaagg cggttacaag tgtgaatgta gtcgtggcta tcaaatggat
781 cttgctactg gcgtgtgcaa ggcagtaggc aaagagccaa gtctgatctt cactaatcga
841 agagacatca ggaagattgg cttagagagg aaagaatata tccaactagt tgaacagcta
901 agaaacactg tggctctcga tgctgacatt gctgcccaga aactattctg ggccgatcta
961 agccaaaagg ctatcttcag tgcctcaatt gatgacaagg ttggtagaca tgttaaaatg
1021 atcgacaatg tctataatcc tgcagccatt gctgttgatt gggtgtacaa gaccatctac
1081 tggactgatg cggcttctaa gactatttca gtagctaccc tagatggaac caagaggaag
1141 ttcctgttta actctgactt gcgagagcct gcctccatag ctgtggaccc actgtctggc
1201 tttgtttact ggtcagactg gggtgaacca gctaaaatag aaaaagcagg aatgaatgga
1261 ttcgatagac gtccactggt gacagcggat atccagtggc ctaacggaat tacacttggc
1321 cttataaaaa gtcgcctcta ttggcttgat tctaagttgc acatgttatc cagcgtggac
1381 ttgaatggcc aagatcgtag gatagtacta aagtctctgg agttcctagc tcatcctctt
1441 gcactaacaa tatttgagga tcgtgtctac tggatagatg gggaaaatga agcagtctat
1501 ggtgccaata aattcactgg atcagagcta gccactctag tcaacaacct gaatgatgcc
1561 caggacatta ttgtctatca tgaacttgta cagccatcag gtaaaaattg gtgtgaagaa
1621 gacatggaga atggaggatg tgaataccta tgcctgccag caccacagat taatgatcac
1681 tctccaaaat atacctgttc ctgtcccagt gggtacaatg tagaggaaaa tggccgagac
1741 tgtcaaagga tcaatgtgac cacagcagta tcagaggtca gtgttccccc aaaagggact
1801 tctgccgcat gggccattct tcctctcttg ctcttagtga tggcagcagt aggtggctac
1861 ttgatgtggc ggaattggca acacaagaac atgaaaagca tgaactttga caatcctgtg
1921 tacttgaaaa ccactgaaga ggacctctcc atagacattg gtagacacag tgcttctgtt
1981 ggacacacgt acccagcaat atcagttgta agcacagatg atgatctagc ttgacttctg
2041 tgacaaatgt tgacctttga ggtctaaaca aataataccc ccgtcggaat ggtaaccgag
2101 ccagcagctg aagtctcttt ttcttcctct cggctggaag aacatcaaga tacctttgcg
2161 tggatcaagc ttgtgtactt gaccgttttt atattacttt tgtaaatatt cttgtccaca
2221 ttctacttca gctttggatg tggttaccga gtatctgtaa cccttgaatt tctagacagt
2281 attgccacct ctggccaaat atgcactttc cctagaaagc catattccag cagtgaaact
2341 tgtgctatag tgtataccac ctgtacatac attgtatagg ccatctgtaa atatcccaga
2401 gaacaatcac tattcttaag cactttgaaa atatttctat gtaaattatt gtaaactttt
2461 tcaatggttg ggacaatggc aataggacaa aacgggttac taagatgaaa ttgccaaaaa
2521 aatttataaa ctaattttgt acgtatgaat gatatctttg acctcaatgg aggtttgcaa
2581 agaccgagtg ttcaagctac tgtacatttt ttttcaagtg ctaaaaaatt aaaccaagca
2641 gcttaaccat ggtttgtgcc tgttcctcta ggatgaactc ctatcctgag tagtaccaag
2701 tgttctaact aaatgtgtga gctgtagttc ttgatgttgt ataactaagc ctgtaattgg
2761 gctggtttct cttacaccct agtacagtta aaaaatgaag tactgtttaa catttgctcc
2821 cgaaatattt cttactgtgt aaaagaagct agcttagtct gtacctag
//