LOCUS AK095681 2787 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ38362 fis, clone FEBRA2000762, highly similar
to Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 40 (DHX40),
mRNA.
ACCESSION AK095681
VERSION AK095681.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2787)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2787
/clone="FEBRA2000762"
/clone_lib="FEBRA2"
/db_xref="H-InvDB:HIT000020536"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 61..2400
/codon_start=1
/note="highly similar to Homo sapiens DEAH
(Asp-Glu-Ala-His) box polypeptide 40 (DHX40), mRNA"
/protein_id="BAG53107.1"
/translation="MSRFPAVAGRAPRRQEEGERSRDLQEERLSAVCIADREEKGCTS
QEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIG
VTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG
DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL
SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDIL
VFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP
PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQ
RSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFP
YLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCE
DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSS
GAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLC
AGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYAR
IVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGISKDV
LKKMQRRNDDKSISDARARFLERKQQRTQDHSDTRKETG"
BASE COUNT 868 a 525 c 639 g 755 t
ORIGIN
1 ttttcccctc ccatctcctc agatcggtgg acgtgctcgc ctccactcgg ggccaggtct
61 atgtcccggt ttcccgcagt cgcgggcagg gcgccaaggc ggcaggagga gggtgagcgg
121 tcaagagacc tccaggaaga gcggctctcg gctgtttgca tcgccgatag agaagagaaa
181 ggatgcacgt cccaggaggg aggaactact ccaacttttc ctattcagaa acaaagaaaa
241 aagattattc aagctgtgag ggacaattca ttccttattg ttactggaaa tacaggaagt
301 ggtaaaacaa ctcaactccc aaaatatcta tatgaagcag ggttttcaca acatggtatg
361 attggtgtaa ctcaaccacg aaaagtagct gctatatcag ttgctcagag agtagctgaa
421 gaaatgaaat gcactttggg atccaaagta ggataccaag ttcgttttga tgattgcagt
481 tctaaggaga cagcaatcaa atatatgact gatggatgtt tactgaaaca tattctggga
541 gacccaaatc ttaccaaatt cagtgtcatt attttggatg aagcccatga aagaactcta
601 actacagata tcttatttgg tttattgaag aagctatttc aggagaagtc tcctaatagg
661 aaggagcatt taaaagtggt ggtaatgtca gcaactatgg aattagccaa gctctctgca
721 ttctttggaa attgtccaat atttgatata cctggaaggc tttatccagt cagagagaaa
781 ttctgcaatt tgattggtcc acgagacaga gaaaatactg cgtatattca agcgattgtg
841 aaagtcacca tggatatcca tttgaatgaa atggctggag acatcttggt ttttctgact
901 ggccagtttg aaatagaaaa aagttgtgag ttactttttc agatggcaga gtctgttgat
961 tatgattatg atgttcaaga taccaccctc gatggcttgt taatattgcc gtgttatgga
1021 tcaatgacaa cagatcaaca gaggaggata tttttgccac caccacctgg aattagaaaa
1081 tgtgtcatat ccaccaatat ttctgcaacg tctttgacaa tagatggaat cagatatgtg
1141 gtagatggtg gcttcgtgaa gcagttaaat cacaacccca gattagggtt ggacatcctg
1201 gaggtggttc caatttcaaa gagcgaggca ttacagcgaa gtggccgagc tggcaggact
1261 tcttcaggaa aatgctttcg gatctatagt aaagattttt ggaaccagtg tatgcctgac
1321 catgtgatcc ctgaaattaa gagaactagt ttgacatctg tagttctgac cttaaagtgc
1381 cttgccatac acgatgtcat aaggtttccc tatttggatc cacctaatga gagacttatt
1441 ttagaagctc ttaaacaact ttaccagtgt gatgctattg acaggagtgg ccatgtcacc
1501 agattgggtt tgtctatggt ggagtttcct ttgcctccac atctgacatg tgcagtaata
1561 aaagctgctt ccctggattg tgaagatcta ctacttccaa tagcagcaat gttgtctgtg
1621 gaaaacgtct tcattagacc tgttgatcca gagtaccaga aggaagcaga acagagacat
1681 cgagaattgg cagctaaagc tggaggattt aatgactttg caactttagc tgtcatcttt
1741 gaacaatgca aatcaagtgg agctccagct tcatggtgcc aaaaacactg gattcattgg
1801 aggtgcttat tttctgcatt tcgtgtggaa gctcaacttc gagaactaat caggaagctt
1861 aaacagcaaa gtgatttccc aaaagagacc tttgaaggcc ctaaacatga agtactacga
1921 agatgtcttt gtgcgggcta tttcaaaaat gtagctcgaa gatctgttgg gagaacgttt
1981 tgcacaatgg atggtcgtgg aagcccagtt cacattcatc cttcctcagc acttcatgaa
2041 caggaaacca aacttgaatg gatcattttt catgaggtat tggttaccac caaagtctac
2101 gcaagaattg tatgcccaat ccgttatgaa tgggtaagag acttgttacc caagttgcat
2161 gaatttaatg cacatgattt gagcagtgtg gcccgacgtg aagtgagaga agatgcaaga
2221 aggagatgga caaataagga aaatgtaaag cagctaaagg atggaatatc gaaagacgtc
2281 ttaaagaaaa tgcaaagaag aaatgatgac aaatccatat ctgatgcacg ggctcgtttc
2341 cttgagagaa agcagcagag gacccaggac cacagtgaca cacgaaagga aacaggctaa
2401 ggtggtgaac cctccaattc aggaagtggg aaaaggagcc aggaaatgtg cttctacttt
2461 gccagttatt tcagacagca ctaccaagag gaggtggtca gcacttgtta ttggcctatg
2521 aactaaaagc aaatcaaagc tcataaatca aagctcatca gttcccataa atgcagttgt
2581 caaagaaaag atttggttgc catagtcata agcaatgata catgaaacca atgaaagaca
2641 gtacatgtaa taatattttc ctcagtacaa ttttgctggc cttaactggt atcaaacgct
2701 gtcattgaga tgttttcaaa gaacattgag ttgtatttaa tcagcgtgta ctccatttgc
2761 attgaagcat taaaaattat ttttctt
//