LOCUS AK095017 2766 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ37698 fis, clone BRHIP2015679, highly similar
to Ataxin-2.
ACCESSION AK095017
VERSION AK095017.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2766)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2766
/clone="BRHIP2015679"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000019872"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 640..1890
/codon_start=1
/note="highly similar to Ataxin-2"
/protein_id="BAG52971.1"
/translation="MRMVHILTSVVGSKCEVQEKNGGIYEGVFKTYSPKCDLVLDAAH
EKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAKRDAFTDSAISAKVNGEHK
EKDLEPWDAGELTANEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVP
LERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREG
HSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFNPNSGS
DQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSGPPSRPSRPPSHP
SAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSE
AATPPVARTSPSGGTWSSVVSGGR"
BASE COUNT 726 a 654 c 714 g 672 t
ORIGIN
1 ctcgggtagc ggcgatggtc agccccggct cccccttccg cacgatcctc cgcccgcagc
61 gtggggatgc tcgggcagct cctccactcc cggtttaggt gtgaacgttg gaggggtctg
121 gaggctgtgg tggcgttttc cggaacatgt ccccctccat gggggacatc tctggagggg
181 agaagttagg gccgcgtccc ccgtgccggt taaaggggta ggcaccgggc tcctccggaa
241 tcatcagggt ctgtcggggc tctctccccg ccccctccga gtcctgggaa agatcggagg
301 acggggtgga gacaagtggg ccttggcccc cgcacccctc tgcgttcgtg tccgaggcgg
361 cggcgggggc tcccgaactc ccctgaaatc gtggggctcc atgtggcctc cggcagcgtt
421 ccaccctccc ccacctgggg aagggaaggg gtggggagtg cccggccccg tcccggcctt
481 cctccttccc ccgccagacc tctccggcgc gcgggtggtg gccgatccgc attgctgttc
541 gaggccgcag tggagaaggc gcctgtggaa catcgaggtc gaaacagtaa caaaggactg
601 cctcagtcta cgatttcttt tgatggaatc tatgcaaata tgaggatggt tcatatactt
661 acatcagttg ttggctccaa atgtgaagta caagagaaaa atggaggtat atatgaagga
721 gtttttaaaa cttacagtcc gaagtgtgat ttggtacttg atgccgcaca tgagaaaagt
781 acagaatcca gttcggggcc gaaacgtgaa gaaataatgg agagtatttt gttcaaatgt
841 tcagactttg ttgtggtaca gtttaaagat atggactcca gttatgcaaa aagagatgct
901 tttactgact ctgctatcag tgctaaagtg aatggcgaac acaaagagaa ggacctggag
961 ccctgggatg caggtgaact cacagccaat gaggaacttg aggctttgga aaatgacgta
1021 tctaatggat gggatcccaa tgatatgttt cgatataatg aagaaaatta tggtgtagtg
1081 tctacgtatg atagcagttt atcttcgtat acagtgccct tagaaagaga taactcagaa
1141 gaatttttaa aacgggaagc aagggcaaac cagttagcag aagaaattga gtcaagtgcc
1201 cagtacaaag ctcgagtggc cctggaaaat gatgatagga gtgaggaaga aaaatacaca
1261 gcagttcaga gaaattccag tgaacgtgag gggcacagca taaacactag ggaaaataaa
1321 tatattcctc ctggacaaag aaatagagaa gtcatatcct ggggaagtgg gagacagaat
1381 tcaccgcgta tgggccagcc tggatcgggc tccatgccat caagatccac ttctcacact
1441 tcagatttca acccgaattc tggttcagac caaagagtag ttaatggagg tgttccctgg
1501 ccatcgcctt gcccatctcc ttcctctcgc ccaccttctc gctaccagtc aggtcccaac
1561 tctcttccac ctcgggcagc cacccctaca cggccgccct ccgggccccc ctcgcggcca
1621 tccagacccc cgtctcaccc ctctgctcat ggttctccag ctcctgtctc tactatgcct
1681 aaacgcatgt cttcagaagg gcctccaagg atgtccccaa aggcccagcg acatcctcga
1741 aatcacagag tttctgctgg gaggggttcc atatccagtg gcctagaatt tgtatcccac
1801 aacccaccca gtgaagcagc tactcctcca gtagcaagga ccagtccctc ggggggaacg
1861 tggtcatcag tggtcagtgg gggtaggtaa cacttgggca taatgatggt actcattttg
1921 tcattacact agatataaag agggctgagc tacaactctg tttgaggaag tgtaagtatg
1981 tatatgttaa aaatagtaga atcaccagga attgggaaac ccatattttt attctgggct
2041 ctaccactta ttcatcatat attaaagcaa gtcagacact cattctgaag ttgagatttc
2101 gcagtgagta aagtgttaat aattcttgcc tagtctacat tatgggattg tgatgagatt
2161 cctataaggt tcataaatac agatatattg taaaactata aagttttgta aagtacctct
2221 ctaatatgag gcaaacacag tatgtaacac tatttggagg gaccgtattt ccttatcttt
2281 ttagcagctt tgtttatcag tacattctat aaacatttat ttttggctta cattgtagtg
2341 tgtttctata gcatctgtat atggcactaa ttcccaacta tatttccata ataaggaata
2401 tcaaatacaa ataaagggtc caagttttat ttgtgattag cataaggaat atgctgacag
2461 cagctataaa agtataaaaa ttaggctggg tgtggtggct cacgcctgta atcccagcac
2521 tttgggaggc tgaggtgggc ggatcacaag gtcaggagat cgagaccatc ctggctaaca
2581 cggtgaaacc ccgtccctac taaaagtaca aaaaaaatta gccgggcatg gtggcgggtg
2641 cctgtagtcc cagctacttg ggaggctgag gcaggagaat ggcatgaact cgggaagcgg
2701 agcttgcagt tagctgagat cacgccattg cactccagca tgggcaacag agcaagactc
2761 tgtctc
//