LOCUS AK094871 1993 bp mRNA linear HUM 12-JUL-2008
DEFINITION Homo sapiens cDNA FLJ37552 fis, clone BRCAN2028319, highly similar
to Chromo domain-helicase-DNA-binding protein 1 (EC 3.6.1.-).
ACCESSION AK094871
VERSION AK094871.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1993)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..1993
/clone="BRCAN2028319"
/clone_lib="BRCAN2"
/db_xref="H-InvDB:HIT000019726"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="caudate nucleus"
CDS 416..1321
/codon_start=1
/note="highly similar to Chromo
domain-helicase-DNA-binding protein 1 (EC 3.6.1.-)"
/protein_id="BAG52945.1"
/translation="MFSFTGVLVIYEVLKKCIGKLISLRVCSIEGCVCVYVFVPGGKE
FHEKKLNIFHQTNLICLFLNSSRNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNS
DQNSNLNPHVIRNPDVERLKENTNHDDSSRDSYSSDRHLTQYHDHHKDRHQGDSYKKS
DSRKRPYSSFSNGKDHRDWDHYKQDSRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRS
HSDHRSHSDHRLHSDHRSSSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPY
GSRSPFEHSVEHKSTPEHTWSSRKT"
BASE COUNT 656 a 357 c 337 g 643 t
ORIGIN
1 tatttaaggt atacaatttg atgatttgat atacacatgc attgtgaaat aattacagtc
61 tctgattaat tactgatgcc tcccttggga tgggaagaga tagcaaactg tacctcattt
121 atggtgtttg gttgtgttac tcttgggacc attacattac cattattaag tgacagttaa
181 ctttttaatg cattatttaa gacaattctt tacaagcata attcatatta tctgatggta
241 tttccactcc agttattaac atacctgtcc cttatatgca taatcaggat cacaatatga
301 atctgagtca cttcctgatt taatttatgt ctttggtgca tttcaaatta ggattgtact
361 gcttttcacc ctaaagacta taaaatgaag cgatttggaa gagaagtaaa atttaatgtt
421 tagtttcact ggagtcttag tcatatatga agttttgaaa aaatgcatag gaaaattaat
481 atccttaaga gtttgttcca tagagggctg tgtatgtgta tatgtgtttg tgcctggagg
541 gaaggagttc catgaaaaaa aactaaatat tttccaccag actaacttaa tttgcctttt
601 tttaaattct tctagaaacc tgtggatttt tgtatctaag tttactgaat ttgatgcaag
661 aaaattacat aaattatata agcatgctat taaaaaacgg caggagtctc agcaaaacag
721 tgatcaaaac agcaacttga atcctcacgt gattagaaat ccagatgtgg aaagattaaa
781 agagaataca aatcacgatg atagcagcag ggacagttat tcctctgata gacacttaac
841 tcagtaccat gatcatcata aagaccgaca tcagggagat tcttacaaaa aaagtgattc
901 caggaaaaga ccctattctt cttttagtaa tggtaaagac catcgtgatt gggatcacta
961 caagcaagac agcagatatt acagtgacag agagaaacac agaaaactgg atgatcacag
1021 gagtagagat cacaggtcaa atttggaagg aagtttaaaa gatagatctc attctgatca
1081 tcgttctcac tcagatcatc ggttacattc agaccaccgg tcaagttctg aatatacgca
1141 ccataaatct tccagggatt ataggtatca ctcagactgg caaatggacc acagagcttc
1201 cagcagtggc cctaggtcac cactagatca gagatctcct tatggctcca gatctccatt
1261 tgaacattca gttgaacaca aaagtacacc ggagcatacc tggagtagtc ggaaaacata
1321 acaaaaactg atacttcgtc tttctggact tttcttttag ccatatatca taaaccaaca
1381 cagtaattgc cttacatgac ttgaaagata taaacagatc ttctatcagt agcagtattg
1441 ttacttcttt ccaggatgca aggtctatta tcccaacaga agagaaaata tttttatatt
1501 taaggattat gctgcactgt actacaaaat tgtagtactt ttttttgttt tcttttttaa
1561 agaaatggaa aatgtttact attacaggga cctcaacact gccctcccat acaggctgga
1621 taaaactgtt tttaagtcag tgattttaga ctgacctcca tttaaattat gtttatatat
1681 gaactttact ctgacctgtg atcatgtttc aggaaggaat gaaagagagt tctttcttaa
1741 taaagaaaaa cactcaagga ctttgttcat ttccaaagct acttgtttac attgtacact
1801 gcgaccacct tgccgctttt catcacaagc ttgaatattt aaattctgta cttatatctg
1861 taaaatagcc aggaatttcc tgtttgtgat ctattatgcc tttttacaaa aaaaatggct
1921 gtaaattatt gtaaatatta aaggaacttt ccttacttcc ttccctttcc ctaccaactc
1981 aggccttctt att
//