LOCUS AK094663 2829 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ37344 fis, clone BRAMY2021139, highly similar
to Ubiquitin ligase SIAH1 (EC 6.3.2.-).
ACCESSION AK094663
VERSION AK094663.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2829)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2829
/clone="BRAMY2021139"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000019518"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 1407..2303
/codon_start=1
/note="highly similar to Ubiquitin ligase SIAH1 (EC
6.3.2.-)"
/protein_id="BAG52904.1"
/translation="MVIIIFLLPPYVFISEMSRQTATALPTGTSKCPPSQRVPALTGT
TASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLA
MEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV
MPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGH
QQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFA
TSIAQLFAENGNLGINVTISMC"
BASE COUNT 756 a 566 c 553 g 954 t
ORIGIN
1 tttcaccccc aagacaaata gtggcctgcc attttccagc ccaggtagct tcctgggaaa
61 agttgcttgt tttatctttg actcagcctg gctagttaca ttgtcgatta tttcttccag
121 atgatattta cctgttaaat aatgtttatt actctgctga tgaatgtttt cagcaacgct
181 ggagaaccct aggctgcaag gggttcttca cctgttgact ccatccccca cccccagtat
241 ggcatatatc tctgccgtgc tatcatcttt attctttcct ttttcattgt ctcttcctga
301 ctgtcctcct ttgttcatta tgtctgacac atattgtgga ttgaaagtag aacagaaaga
361 tatactttct ctaccagact aaaaagtttt gagatggccc tccatttctc ccatgcctca
421 cttcacctta gttgtgtttt tatttatttt tatattttcg ccaccttcac tagcgagtac
481 atcccctcac tcttgaggtg ggcactgatc agtaggaaat aagattaata cctggctggt
541 gataatttgg ggggaagact taattagata gagatggata atgggatggc agcagacctt
601 tccccttgtg acccttcccc tcatttccaa aatacacctc tagagtagat aattgcttac
661 cattaagaag agttaatgga aggtgatact ctgattcttt ggcattggaa ctacattcaa
721 tccgcggtat cctcggatta gttctaggac ccccttctcc ataccaaaac ctgaggatgc
781 tcaagtccct gatagaaaat ggtgtcatat ttgtatgtgc atattctctt gtataattta
841 agtgatctct ggattactta atacaatgta aacaatatgt aaatagttgt tatagactgt
901 attttaaaaa ttttgtattc tttataaatt tttctgaata ttttcaatcc atggctggtg
961 aagtcctcgg atgcagaccg tgtggataca gagtgccgat tttatacagg agttcacctg
1021 taactccctg tacctatcaa cagctgactc caaattagaa agaaatagag taagggagcc
1081 tcagggagag tcctagcaaa acggattcga ttaaacttca gttccttgta tagtttcttt
1141 agttgtttat ggtccatttt ctattttagc atttattatt ctatgtagtc tatccaaaga
1201 cgattaaggg agttccacat gttttccgga acattttgaa aagagagctt atccagtgta
1261 cagatcctaa taaagtgcac attcagtgta attttatttt tttaatatct tttttaatcc
1321 tatttttctt cctcttttgc tcagtaaatt ttgtatgaaa ctttaaaagg acttatggca
1381 tgtaaacatt atttataaag taagtcatgg ttataattat ttttctcctg cctccttatg
1441 tatttatttc agaaatgagc cgtcagactg ctacagcatt acctaccggt acctcgaagt
1501 gtccaccatc ccagagggtg cctgccctga ctggcacaac tgcatccaac aatgacttgg
1561 cgagtctttt tgagtgtcca gtctgctttg actatgtgtt accgcccatt cttcaatgtc
1621 agagtggcca tcttgtttgt agcaactgtc gcccaaagct cacatgttgt ccaacttgcc
1681 ggggcccttt gggatccatt cgcaacttgg ctatggagaa agtggctaat tcagtacttt
1741 tcccctgtaa atatgcgtct tctggatgtg aaataactct gccacacaca gaaaaagcag
1801 accatgaaga gctctgtgag tttaggcctt attcctgtcc gtgccctggt gcttcctgta
1861 aatggcaagg ctctctggat gctgtaatgc cccatctgat gcatcagcat aagtccatta
1921 caaccctaca gggagaggat atagtttttc ttgctacaga cattaatctt cctggtgctg
1981 ttgactgggt gatgatgcag tcctgttttg gctttcactt catgttagtc ttagagaaac
2041 aggaaaaata cgatggtcac cagcagttct tcgcaatcgt acagctgata ggaacacgca
2101 agcaagctga aaattttgct taccgacttg agctaaatgg tcataggcga cgattgactt
2161 gggaagcgac tcctcgatct attcatgaag gaattgcaac agccattatg aatagcgact
2221 gtctagtctt tgccaccagc attgcacagc tttttgcaga aaatggcaat ttaggcatca
2281 atgtaactat ttccatgtgt tgaaatggca atcaaacatt ttctggccag tgtttaaaac
2341 ttcagtttca cagaaaataa ggcacccatc tgtctgccaa cctaaaactc tttcggtagg
2401 tggaagctag acacatgaag gtaaataaaa agaaaggctg ttaaatacag gaaacagttg
2461 catgtagtaa cactaatata tttaaaaata agtcaacagt aaaccactga aaaaatatat
2521 gtatatacac ccaagatggg catcttttgt attaagaaag gaagcattgt aaaataattc
2581 tgagttttgt gtttgttgta gattgattgt attgttgaaa aagtttgttt ttgcgtggga
2641 gtgtgtgcct gcgtgggtgt gtgcgtgttt gggttttttt cctttaactg acaagccatc
2701 ttgagtggtc atgggccact gcttttccct ttgtgagtca atacatagtg ctgctgtgtg
2761 ctttttttgt gtgtatttgc taatttttat taattttagt ttttcattaa ataaatttga
2821 cttttctgt
//