LOCUS AK093540 2283 bp mRNA linear HUM 11-JUL-2008
DEFINITION Homo sapiens cDNA FLJ36221 fis, clone THYMU2000950, highly similar
to Eukaryotic translation initiation factor 3 subunit
6-interacting protein.
ACCESSION AK093540
VERSION AK093540.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2283)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2283
/clone="THYMU2000950"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000018407"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 717..2117
/codon_start=1
/note="highly similar to Eukaryotic translation
initiation factor 3 subunit 6-interacting protein"
/protein_id="BAG52737.1"
/translation="MSYRPVVSPVMSLTRRCMRSRTSMRTDAVFLILYKELYYRHIYA
KVSGGPSLEQRFESYYNYCNLFNYILNADGPAPLELPNQWLWDIIDEFIYQFQSFSQY
RCKTAKKSEEEIDFLRSNPKIWNVHSVLNVLHSLVDKSNINRQLEVYTSGGDPESVAG
EYGRHSLYKMLGYFSLVGLLRLHSLLGDYYQAIKVLENIELNKKSMYSRVPECQVTTY
YYVGFAYLMMRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHALLAIA
LTMYPMRIDESIHLQLREKYGDKMLRMQKGDPQVYEELFSYSCPKFLSPVVPNYDNVH
PNYHKEPFLQQLKVFSDEVQQQAQLSTIRSFLKLYTTMPVAKLAGFLDLTEQEFRIQL
LVFKHKMKNLVWTSGISALDGEFQSASEVDFYIDKDMIHIADTKVARRYGDFFIRQIH
KFEELNRTLKKMGQRP"
BASE COUNT 546 a 600 c 541 g 596 t
ORIGIN
1 aaggtaaggt ggccgtaagg gcgcggtggg ctccacgacg gggtgatctc tgggaccact
61 ggatgtgggt cccggcgcga ggcagcttcc gggtcgcggc cagctccggc cgacctcccg
121 cccggccctc aggctgctcc cacagttccc ggtccctaga caaccctggc tctgcccgcc
181 cacttcgcgt gttcgattgg cttgtccttc ccctttctaa gaccggagac taaggcctgt
241 tagacgtttc tgtgtttctg cacctgagtt tttttggtct aggctccgtc tggtcaaatc
301 tcgctgattc ccacagcctc ttgtcctttg ctccacctca ttgcacccgt aatgttgtat
361 tgtcattgtc tgtttactgt cccttttctc taaggcgtgt gagttcctca aaggcaggca
421 cagtgtctta ttcgcctctg tatccttagc tctctgcttg gcatctagac tctaggatga
481 gcgttttgaa ttcacgactt ggcggctgtc cttgactgtg tctctttcct tctaggcggc
541 ttatgacccc tacgcttatc ccagcgacta tgatatgcac acaggagatc caaagcagga
601 ccttgcttat gaacgtcagt atgaacagca aacctatcag gtgatccctg aggtgatcaa
661 aaacttcatc cagtatttcc acaaaactgt ctcagatttg attgaccaga aagtgtatga
721 gctacaggcc agtcgtgtct ccagtgatgt cattgaccag aaggtgtatg agatccagga
781 catctatgag aacagatgct gtcttcctga ttttatacaa agaattatac tacaggcaca
841 tatatgccaa agtcagtggg ggaccttcct tggagcagag gtttgaatcc tattacaact
901 actgcaatct cttcaactac attcttaatg ccgatggtcc tgctcccctt gaactaccca
961 accagtggct ctgggatatt atcgatgagt tcatctacca gtttcagtca ttcagtcagt
1021 accgctgtaa gactgccaag aagtcagagg aggagattga ctttcttcgt tccaatccca
1081 aaatctggaa tgttcatagt gtcctcaatg tccttcattc cctggtagac aaatccaaca
1141 tcaaccgaca gttggaggta tacacaagcg gaggtgaccc tgagagtgtg gctggggagt
1201 atgggcggca ctccctctac aaaatgcttg gttacttcag cctggtcggg cttctccgcc
1261 tgcactccct gttaggagat tactaccagg ccatcaaggt gctggagaac atcgaactga
1321 acaagaagag tatgtattcc cgtgtgccag agtgccaggt caccacatac tattatgttg
1381 ggtttgcata tttgatgatg cgtcgttacc aggatgccat ccgggtcttc gccaacatcc
1441 tcctctacat ccagaggacc aagagcatgt tccagaggac cacgtacaag tatgagatga
1501 ttaacaagca gaatgagcag atgcatgcgc tgctggccat tgccctcacg atgtacccca
1561 tgcgtatcga tgagagcatt cacctccagc tgcgggagaa atatggggac aagatgttgc
1621 gcatgcagaa aggtgaccca caagtctatg aagaactttt cagttactcc tgccccaagt
1681 tcctgtcgcc tgtagtgccc aactatgata atgtgcaccc caactaccac aaagagccct
1741 tcctgcagca gctgaaggtg ttttctgatg aagtacagca gcaggcccag ctttcaacca
1801 tccgcagctt cctgaagctc tacaccacca tgcctgtggc caagctggct ggcttcctgg
1861 acctcacaga gcaggagttc cggatccagc ttcttgtctt caaacacaag atgaagaacc
1921 tcgtgtggac cagcggtatc tcagccctgg atggtgaatt tcagtcagcc tcagaggttg
1981 acttctacat tgataaggac atgatccaca tcgcggacac caaggtcgcc aggcgttatg
2041 gggatttctt catccgtcag atccacaaat ttgaggagct taatcgaacc ctgaagaaga
2101 tgggacagag accttgatga tattcacaca cattcaggaa cctgttttga tgtattatag
2161 gcaggaagtg tttttgctac cgtgaaacct ttacctagat cagccatcag cctgtcaact
2221 cagttaacaa gttaaggacc gaagtgtttc aagtggatct cagtaaagga tctttggagc
2281 cag
//