LOCUS AK093530 2682 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ36211 fis, clone THYMU2000300, highly similar
to Homo sapiens transcription factor 7 (T-cell specific, HMG-box)
(TCF7), transcript variant 5, mRNA.
ACCESSION AK093530
VERSION AK093530.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2682)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2682
/clone="THYMU2000300"
/clone_lib="THYMU2"
/db_xref="H-InvDB:HIT000018397"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 203..1012
/codon_start=1
/note="highly similar to Homo sapiens transcription
factor 7 (T-cell specific, HMG-box) (TCF7), transcript
variant 5, mRNA"
/protein_id="BAG52735.1"
/translation="MYKETVYSAFNLLMHYPPPSGAGQHPQPQPPLHKANQPPHGVPQ
LSLYEHFNSPHPTPAPADISQKQVHRPLQTPDLSGFYSLTSGSMGQLPHTVSWFTHPS
LMLGSGVPGHPAAIPHPAIVPPSGKQELQPFDRNLKTQAESKAEKEAKKPTIKKPLNA
FMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLY
PGWSARDNYGKKKRRSREKHQESTTGGKRNAFGTYPEKAAAPAPFLPMTVL"
BASE COUNT 670 a 841 c 642 g 529 t
ORIGIN
1 cctccaggtc cttcccctaa aacttggcac tgccgatact cccagcccgt tccttcccaa
61 gtcaggaact tgcaggggac cccttggcaa ttctttttct ctcaagagca gacagccttc
121 agtcccagcc gctgccaggg ctggtgtgtc tgacccagct gtggtttttc caggcctgaa
181 ggccccggag tgcaccagcg gcatgtacaa agagaccgtc tactccgcct tcaatctgct
241 catgcattac ccacccccct cgggagcagg gcagcacccc cagccgcagc ccccgctgca
301 caaggccaat cagccccccc acggtgtccc ccaactctct ctctacgaac atttcaacag
361 cccacatccc acccctgcac ctgcggacat cagccagaag caagttcaca ggcctctgca
421 gacccctgac ctctctggct tctactccct gacctcaggc agcatggggc agctccccca
481 cactgtgagc tggttcaccc acccatcctt gatgctaggt tctggtgtac ctggtcaccc
541 agcagccatc ccccacccgg ccattgtgcc cccctcaggg aagcaggagc tgcagccctt
601 cgaccgcaac ctgaagacac aagcagagtc caaggcagag aaggaggcca agaagccaac
661 catcaagaag cccctcaatg ccttcatgct gtacatgaag gagatgagag ccaaggtcat
721 tgcagagtgc acacttaagg agagcgctgc catcaaccag atcctgggcc gcaggtggca
781 cgcgctgtcg cgagaagagc aggccaagta ctatgagctg gcccgcaagg agaggcagct
841 gcacatgcag ctatacccag gctggtcagc gcgggacaac tacgggaaga agaagaggcg
901 gtcgagggaa aagcaccaag aatccaccac aggaggaaaa agaaatgcat tcggtactta
961 cccggagaag gccgctgccc cagccccgtt ccttccgatg acagtgctct aggctgcccc
1021 gggtccccag ctccccagga ctcaccctca taccatctgc tgccccgctt ccccacagaa
1081 ctgcttacta gccctgcgga gccggcacct acatccccag gtctctccac tgctctcagc
1141 ctcccaaccc cagggccccc acaggccccc cgcagcaccc tgcagagcac acaggtacag
1201 caacaggaat ctcagagaca ggtggcctag caggcacagg acacctggcc gcctccagga
1261 gcctaccccc tgaaagtgac agagacccag atctcatgga aactggccag gggtcctgtt
1321 aacgtcatct cagggtccag accctgaaga tttcagaggc tgcagaactt ctgcctgaac
1381 ctggggtcat cgattcaaac tgctccaagt ggtgggaatc agatctgtct tgatgtgtca
1441 tctaattaag ggaatccctt gtacctatgg ctgcctgcat ctattctttg taccatctgt
1501 cttgccagcc agaagcctct gcctccctag cttttctgct ataggtcaga gatgggctga
1561 actgagccta gctaccttct ctacccatct cccccatccc ccactgccac accctcccca
1621 ttcagacact tcatggacca agaatgagct ggtttgtcaa acaacatgtg agcatggtca
1681 caagcacaaa gctcaagatg acagctcttc taaggaaatg gagaagctct gtttataaaa
1741 acaaaaacaa aaccagctgc tactcataag ttggaccaga ggaagcccct tactatgatc
1801 tcaggagctt gcaagaagca ggaaggggaa tggaataggt taagtttagg cctatcaacc
1861 taagcaacag aaataatctg acactacctt atcaggcaaa ttggggaggg gagggtgtat
1921 ctagctctag ttcaaattat ttggaagtgt tccctgagaa acccaccagc ctaagaagct
1981 ctggccccag gcttgtcact agcagctgca gtcaacagtt caaagaagtc atggcccaaa
2041 tccagtgtgc acccctcccc attcacagag cctttttcac aattccattt ccagttcatc
2101 tatggcagtc cagccagctc ctgggcagct tgagagggca aacccaaaac ctcatgacag
2161 ccagagcctg tctttcagca ttcagtccgc ctggccggct ccagtttccc catggggctg
2221 cgggacagag gaccattaca actagatcaa ggagcccaga aaacctccag tagtggacaa
2281 caggttttca ccatagccta cgttaaccca tttttgagcc aagcttcaac cctcagcctt
2341 gaaaaacaag tctttaattt aatttttgtt ttttgcctaa atccaaagaa aaagggctgc
2401 cgggccaggc gcggtggctc acgcctgtaa tcccagcact ttggcaggcc gaggcaggtg
2461 gatcacctga cgtcagtagt ttgagaccag cctggccaac atggtgaaac cctgtatcta
2521 ctaaaaatac aaaaattagc cggacgtggt ggtgcgcgca tgtgatccca gctactcggg
2581 aggctgaggc ggaagagtca cttgaacccg ggaggcggag gttccagtga gccgagatgg
2641 cgctattgca ctccagtctg ggtaacaggg agactgcatc tc
//