LOCUS AK093146 2820 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ35827 fis, clone TESTI2006453, weakly similar
to Microtubule-associated protein like echinoderm EMAP.
ACCESSION AK093146
VERSION AK093146.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2820)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2820
/clone="TESTI2006453"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000018013"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 68..2737
/codon_start=1
/protein_id="BAC04073.1"
/translation="MELVKAALAEALRLLRLQVPPSSLQGSGTPAPPGDSSLAAPPGL
PPTCTPSLVSRGTQTETEVELKSSPGPPGLSNGPPAPQGASEEPSGTQSEGGGSSSSG
AGSPGPPGILRPLQPPQRADTPRRNSSSSSSPSERPRQKLSRKAISSANLLVRSGSTE
SRGGKDPLSSPGGPGSRRSNYNLEGISVKMFLRGRPITMYIPSGIRSLEELPSGPPPE
TLSLDWVYGYRGRDSRSNLFVLRSGEVVYFIACVVVLYRPGGGPGGPGGGGQRHYRGH
TDCVRCLAVHPDGVRVASGQTAGVDKDGKPLQPVVHIWDSETLLKLQEIGLGAFERGV
GALAFSAADQGAFLCVVDNSNEHMLSVWDCSRGMKLAEIKSTNDSVLAVGFNPRDSSC
IVTSGKSHVHFWNWSGGVGVPGNGTLTRKQGVFGKYKKPKFIPCFVFLPDGDILTGDS
EGNILTWGRSPSDSKTPGRGGAKETYGIVAQAHAHEGSIFALCLRRDGTVLSGGGRDR
RLVQWGPGLVALQEAEIPEHFGAVRAIAEGLGSELLVGTTKNALLRGDLAQGFSPVIQ
GHTDELWGLCTHPSQNRFLTCGHDRQLCLWDGESHALAWSIDLKETGLCADFHPSGAV
VAVGLNTGRWLVLDTETREIVSDVIDGNEQLSVVRYSPDGLYLAIGSHDNVIYIYSVS
SDGAKSSRFGRCMGHSSFITHLDWSKDGNFIMSNSGDYEILYWDVAGGCKQLKNRYES
RDREWATYTCVLGFHVYVPVRSCQGAEPHVRGPRQPRDQRPIHARRLAPRLAGRQGRQ
HLPVASAGRWGRGAGARHALSNPLPVPRLLPRRLIAAWRDRLARRRGPAPPCPSLAQS
PTTRGRLFPGLTSRHSRSRIFLEGANGAPAHTV"
BASE COUNT 510 a 854 c 894 g 562 t
ORIGIN
1 cggtgacggc cctgctcggg aggccctcca gtctctgagc cagcggcttc gggtgcagga
61 gcaggagatg gaactggtaa aggcagccct ggcagaagcc cttcgcctgc tgcggctgca
121 ggtgccccct tcctccctgc agggctctgg cacaccagct cctccggggg acagcagtct
181 tgcagccccc ccaggactgc cacccacgtg caccccttcc ttggtgagcc gaggcaccca
241 gacggagaca gaggtggagc tcaagtcatc ccctggaccc cctggcctga gcaatggacc
301 cccagcccct cagggggcca gcgaagagcc tagcgggacc caatctgaag gagggggcag
361 cagcagcagt ggtgctggct cccctggccc cccggggatc ctcaggccct tgcagccccc
421 acagcgtgct gacacgccgc gaagaaattc ttcctcctcc tcatccccct cagagcggcc
481 tcggcagaag ctctccagga aggcaatctc ctccgccaac ctgttagtgc ggtccgggag
541 cacagagagc cgtgggggaa aagaccccct ctccagccct gggggccctg gatctcggag
601 gagcaattac aatttggaag gcatctcagt gaagatgttc cttcgagggc gccccattac
661 catgtacatc ccgtctggca tccgcagcct tgaggagctg ccgagtggcc caccgccaga
721 gaccctcagc cttgactggg tttatgggta caggggtcgt gactcccgct ctaatctgtt
781 tgtgttgcgc tctggggagg tggtctactt tatcgcctgt gtggtggtgc tgtaccggcc
841 tggaggaggc ccagggggtc ctggaggtgg cggccagaga cattaccggg ggcacacaga
901 ctgcgttcga tgccttgctg ttcaccctga tggcgttcgg gtagcctcgg gacagacagc
961 tggagtggat aaggatggaa agcccctgca gcctgtggtt cacatctggg actcagagac
1021 gctgttgaaa ctgcaggaga ttggactggg ggccttcgag cggggtgttg gggccctggc
1081 cttttcagct gcggatcagg gtgcctttct ttgtgtggtg gataattcca atgagcacat
1141 gctgtcggtg tgggactgca gccggggaat gaagctggct gagatcaaga gtacaaatga
1201 ctcagtcctg gccgttggct tcaaccctcg tgacagcagc tgcatcgtca ccagtgggaa
1261 atctcacgtc cacttctgga attggagtgg tggagtaggg gttcctggga atgggaccct
1321 tacccggaaa cagggtgtct ttgggaaata caagaaaccc aagtttatcc cttgctttgt
1381 gttccttccg gatggagaca ttctcactgg agactcagag gggaacattc tcacctgggg
1441 gcggagccct tcagattcca agaccccagg caggggtggc gccaaagaga cctatgggat
1501 tgtggcccag gctcacgctc atgaaggttc tatcttcgcc ttgtgtctcc ggagggacgg
1561 gacagtgctg agtggtggcg ggcgggaccg ccggctggta cagtgggggc ccgggttggt
1621 ggccctccag gaggctgaga ttcccgagca cttcggggcc gtgcgagcca ttgctgaagg
1681 gcttggctct gagctgctgg tgggaaccac gaagaatgca ttgctgaggg gagacctggc
1741 ccagggcttc tcccctgtaa tccagggcca cactgatgag ctctgggggc tctgcacaca
1801 cccctcccag aaccgcttcc tcacctgcgg ccacgaccgg cagctctgcc tgtgggatgg
1861 ggagagccat gcactggcct ggagcatcga cctcaaggag actggtctct gtgctgactt
1921 ccacccgagt ggggcagttg tggccgtagg actgaacacg gggaggtggt tggttttgga
1981 cacagagacc agagagatcg tgtctgatgt cattgatggc aatgagcagc tctcagtggt
2041 ccggtacagc ccagatgggt tgtacctggc cattggttcc catgacaacg tgatctacat
2101 ctatagtgtt tccagtgatg gtgccaaatc cagccgcttt ggccgctgta tgggtcactc
2161 cagcttcatc actcatcttg actggtccaa ggatgggaat ttcatcatgt ccaattctgg
2221 ggactatgag attctttact gggacgtggc tggaggctgc aagcagctga agaatcgcta
2281 tgagagccga gaccgggaat gggctaccta cacctgtgtg ctgggctttc acgtctacgt
2341 acccgtgcgc tcgtgccaag gcgccgagcc gcatgtacgg gggccacggc agccacgtga
2401 ccagcgtccg attcacgcac gacgactcgc acctcgtctc gctgggcggc aaggacgcca
2461 gcatcttcca gtggcgagtg ctgggcgctg ggggcgcggg gccggcgccc gccacgccct
2521 ctcgaacccc ctccctgtcc cccgcctcct ccctcgacgt ttgatcgctg cctggcggga
2581 ccgactggcc cggcggcgtg gccccgcccc gccctgccct tccctggccc aatcccccac
2641 gactaggggc cgactctttc ctggactgac ttcgagacat tcccgatcgc gcattttcct
2701 ggagggcgcg aacggcgccc ctgcacacac tgtttagacc cgctggctga gccgggcagc
2761 cccagcctag gccttgactc ccgctgcctg ctgaggggca ataaaccaga accaaagtcg
//