LOCUS AK093102 2347 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ35783 fis, clone TESTI2005568, highly similar
to Homo sapiens cancer susceptibility candidate 1 (CASC1), mRNA.
ACCESSION AK093102
VERSION AK093102.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2347)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2347
/clone="TESTI2005568"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000017969"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 53..1510
/codon_start=1
/note="highly similar to Homo sapiens cancer
susceptibility candidate 1 (CASC1), mRNA"
/protein_id="BAG52654.1"
/translation="MGPKAKKSGSKKKKVTKAERLKLLQEEEERRLKEEEEASLKYEK
EEMERLEIQRIEKEKWHRLEAKDLERRNEELEELYLLERCFPEAEKLKQETKLLSQWK
HYIQCDGSPDPSVAQEMNTFISLWKEKTNETFEEVIEKSKVVLNLIEKLKFILLETPP
CDLQDKNIIQYQESILQLQELLHLKFGVATEILLKQASTLADLDSGNMEKVIKDENVT
LYVWANLKKNPRHRSVRFSETQIGFEIPRILATSDIAVRLLHTHYDHVSALHPVSTPS
KEYTSAVTELVKDDVKNVEKAISKEVEEESKQQERGSHLIQEEEIKVEEEQGDIEVKM
SSAEEESEAIKCEREMKVLSETVSAAQLLLVENSSEKPDFFEDNVVDLCQFTTLGGVY
HLDILELPPQCKPVKGWMIVEILKEGLQKYTYPPETTEEFETENAFPPIEVTLEVHEN
VIFFEDPVVVRWMLKVNIGELMASAMYPTNQKKDL"
BASE COUNT 825 a 393 c 507 g 622 t
ORIGIN
1 acacaatttc tgctccgact ctgcggacta ctgcagtgga gcttgactct taatgggtcc
61 caaagcaaaa aagtctggca gtaagaaaaa gaaagtcacc aaagctgaac gattgaagct
121 gctacaagag gaggaggaga gacgactgaa agaggaagag gaagccagtt tgaaatatga
181 gaaagaagaa atggaaaggc ttgaaataca gcgaattgag aaagaaaaat ggcatcgact
241 tgaagcaaaa gatctagaaa ggagaaatga agaacttgaa gaactttatt tattagagag
301 gtgttttcct gaagcagaga aattgaaaca ggaaactaaa ttgctttctc agtggaagca
361 ctacattcaa tgtgatggga gtcctgatcc ttcagtagcc caagaaatga acacgtttat
421 tagtttgtgg aaagagaaaa caaatgagac ttttgaggaa gtgattgaga agagtaaagt
481 agtgctaaat ttaattgaga aattgaaatt tattttactg gaaactccac catgtgattt
541 gcaagataaa aatataatac agtaccaaga atcaatacta caactgcagg agctccttca
601 tcttaaattc ggtgtagcca cagaaatact tctcaaacaa gctagtactt tggcagatct
661 ggacagtgga aatatggaaa aagtcattaa agatgaaaat gttactctgt atgtgtgggc
721 aaacctcaag aagaatccaa ggcacagaag tgttagattc tctgaaacac aaattggatt
781 tgagattcca aggatattag caacaagtga cattgctgta cgactcctgc atacccacta
841 tgatcatgtt tctgcactgc accctgtttc aacaccatca aaagaataca cttctgcagt
901 aactgagctt gtcaaagatg atgttaagaa tgtagaaaaa gcaatcagca aggaggtcga
961 agaagagtcc aaacaacaag aaagagggtc tcacttaatt caggaggaag aaataaaagt
1021 tgaggaggaa caaggtgata ttgaagtgaa aatgagttct gctgaggaag aatctgaagc
1081 cataaaatgt gaacgagaga tgaaagtatt aagtgaaact gtttcagcag cacagttgtt
1141 gctggtagag aattcttctg aaaagccaga tttctttgaa gacaatgtgg tggatttatg
1201 ccagttcaca actctgggtg gagtatacca cttggatatt ttggagcttc ctccacagtg
1261 taaaccagtg aagggatgga tgattgtgga aatactcaaa gaaggattac agaaatacac
1321 atatcctccg gaaactacag aagagtttga gacagaaaat gctttcccac ctatagaggt
1381 cacacttgag gttcatgaga atgtaatctt ttttgaggat cctgtggttg taaggtggat
1441 gctgaaggta aacattggag aactgatggc atcagcaatg tatcctacaa accaaaagaa
1501 agacttgtaa cattcagcct ggacaccttt ggccctgtta ccttgattca agatgctcat
1561 attaacatgc cgtaccagtc atgggaacta agaccacttg atgtaaataa agtactttta
1621 actgtgacta cagtatttac tgagattcaa atacaaatta aggaaaacct ctgcatgtta
1681 tcttcaatca aactaaaaga caagaaacac atctctattt tggaaggaac ctggatgact
1741 cctattcctt tcattattgc tttgaaagaa gctggactga atatctttcc tactagacac
1801 tctcattttt atgttattat aaacaataag gttcctttgg tagaagtgaa agcttatcga
1861 cagatggccc tactaagttc tgcttttgca tttggttgga gcaagtggaa cctactatgt
1921 aattctacaa aagtcgtatt taaggtgagg gaacacctta ctgaagaatg tactgagaat
1981 cctaattggg cccttttaat gtttagtggt gacagagcac aaagactgaa gatcaaggaa
2041 gagagtgagg cattttctga agcacttaaa gaagaaactg agtttcattc tactttatat
2101 cacatggtga aggattttgc ttctgaggaa gcaatggaga aagtcaggag ttccaactgt
2161 cagtttgtca actctgtgtg ccacatgctg ctctctacca gattgctcag ctactcctaa
2221 cctccactta caaactgtat tgtaagtatg aagaaccaag catggtgaaa gacaggtatt
2281 tctgcaacac aatgtaatga gtgaatgaat acatttcaaa tcaactatta aaaattttct
2341 aatctgc
//