LOCUS AK093056 2381 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ35737 fis, clone TESTI2003579, weakly similar
to Mus musculus serine/arginine repetitive matrix 2 (Srrm2), mRNA.
ACCESSION AK093056
VERSION AK093056.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2381)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2381
/clone="TESTI2003579"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000017923"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 16..2163
/codon_start=1
/note="weakly similar to Mus musculus serine/arginine
repetitive matrix 2 (Srrm2), mRNA"
/protein_id="BAG52643.1"
/translation="MSSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSL
VPTKPATSRNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSK
ASKASDVRCHQRRGTHSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRT
PTSQQKGSRGKSYGRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAK
CQTPTGIPSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRS
RPQSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRS
HSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQS
GSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRS
RSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQ
CRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKE
RDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPS
KEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSG
GQTLSQDDSQADATTSKATLPGERSSSSSPKLA"
BASE COUNT 773 a 674 c 627 g 307 t
ORIGIN
1 ctttttgcgc ccaccatgtc ttcacctaag agatcttcaa agcccagtat gtctctggca
61 cccagtggat cctccatgcc cactgcggat cccaagcctc ctgcttcctt gaagtccacc
121 aaatcagcaa cacccaacag atccttagtg cccaccaaac cagcgacatc ccgtaactca
181 gtcatgagcc caagcagttc caagtccacc aaatcgacca gtacaaaaag agccccttct
241 aaccggccca gcagcaggtc ccgagtccgc agcaaagcaa gaacacccag cagggtgagc
301 accgacacca ggaccagcaa agccagcaag gccagcgacg tgagatgcca ccagcggagg
361 ggcacacaca gccggggtag gacacctggc agaaggggaa gccgcagctc caagaggtca
421 cccagcaggg ccagcactcc tggcaggata agaactcatg gtgccagacc aggcatggcc
481 agcagggtga gaactcccac ttcacagcaa aaagggagcc ggggaaagag ttacggccgg
541 cctagaacca gcaacaggga aaggagtgac agccagccta gaaatctgag caagaagagt
601 taccgcccac caggaggctc aggtataggg aggagttccg agctggctgt aactcccagt
661 acagccaagt gtcaaacccc gactggaatt ccctccaagg agaagagtga caacccatct
721 ccatcctcat caaggaaggt gaagagctac ggtcagatga tcatccccag tagggaaaag
781 agttacagcc ccactgaaat gtccagcagg gtcaagagtt ataaccaggc cagcacccgc
841 agcaggccgc aaagtcacag ccaatctaga agccccagaa ggtcaagaag tggcagtcag
901 aagaggacgc acagcagagt gagaagtcac agttggaaga gaaaccatag cagggcaaga
961 agtcgcaccc ggaagggaat tctgagccag atgggaagac acagccagtc tagaagccac
1021 agcaagggga aaagtcaaaa ccaatctaga acccccagaa gaggaagaag tcacaactgg
1081 tctagaaacc ccagcaagga aagaagtcat agccattcca gaagctccag caaagagaga
1141 gatcacaggg gatctagcag ccccaggaag gagagtggtc gcagtcaatc aggaagcccc
1201 aacaagcaga gagatcacag ccgatctaga agtcccaaca aggcgagaga tcgcagccga
1261 tctagaagtc cctacaaggc gagagatcgc agccgatcta gaagtcccaa caaggcgaga
1321 gattgcagcc gatctagaag tccctacaag gcgagagatc gcagccgatc tagaagtccc
1381 aacaaggcaa gagatcatag ccgatctaga agtcccaaca aggcgagaga tcgcagccga
1441 tctagaagcc ccagcaagga aagggatcac agccaacttg gaagccctag caaagagaga
1501 gatcacagac gatctagaag ccccagcaag gagagacagt gcagacaatc tagaagctcc
1561 agtaaagaga gagatcacag acgatctaga agccccagca aggagagaca gcgcagacaa
1621 tctagaagcc ccaacaagga gagagatcgc agccaatcta gaagccccag cgaggagaga
1681 gagcacagac aatccagaag ccccagcaaa gagagagatc gcagacgatg gagaagcccc
1741 agcaaggaga gagagcgcag acaatctaga agctccagcg aggagagaga tcacagccga
1801 tctagaagcc ccaataagca gagtggttac agtcgaccta gagcctccag caaggagaaa
1861 gctcatagcc gatctagaac ccccagcaaa gaaggaaatc atagccaatc tagaacctct
1921 agcaaggaga gcgaccccag tcaatctaca gtccccagaa gtcccgactg gaagagatcc
1981 cctactagga caagcagtct cagtcagaat agaaccccta gcaagacaag cagccactcc
2041 ccatcaacat ttcccagtgg gggccaaacc ctaagccagg atgacagtca agccgacgcc
2101 accacctcta aggccacctt acctggggaa aggtcttcat catcttctcc caagctggcg
2161 tagcccccag tctcagctgg ctcacgggtc tctgtcatga ccgggggagg ggacaggaga
2221 caggagcaga gcagcagctg agcagcgtcc ctccccggcc agctctccac agccacacct
2281 ccggccacaa gttctctaat acaggatgtt ggcaggtaga gagggatgct ggataggggg
2341 aaaggaaaga cctgtgatga ttcaataaat ttttacatag c
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