LOCUS AK092925 2502 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ35606 fis, clone SPLEN2009512, highly similar
to Sarcospan.
ACCESSION AK092925
VERSION AK092925.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2502)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Matsuo,K.,
Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2502
/clone="SPLEN2009512"
/clone_lib="SPLEN2"
/db_xref="H-InvDB:HIT000017792"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="spleen"
CDS 223..645
/codon_start=1
/note="highly similar to Sarcospan"
/protein_id="BAG52629.1"
/translation="MLCVSYQVDERTCIQFSMKLLYFLLSALGLTVCVLAVAFAAHHY
SQLTQFTCETTLDSCQCKLPSSEPLSRTFVYRDVTDCTSVTGTFKLFLLIQMILNLVC
GLVCLLACFVMWKHRYQVFYVGVRICSLTASEGPQQKI"
BASE COUNT 723 a 504 c 519 g 756 t
ORIGIN
1 gcacacgcgc gcactcgcag cctgtctgaa gcgcagaggt tcaggcggcc aagggacccg
61 cgccggtttc cgcgggcgac ctgcaaatcc tgcccggggc ccggcaggcg ctgcgtcccg
121 gcgcgttggc agttggcgac ccccctcgaa tcccccgtct gctgcgggct ccccgtggcc
181 tttggaggct cggtctgctt agtggcctat cttggcttgt ttatgctttg tgtctcatat
241 caggttgacg aacggacatg tattcaattt tctatgaaac tgttatactt tctgctgagt
301 gccctgggcc tgacggtctg tgtgctggcc gtggcctttg ccgcccacca ctattcgcag
361 ctcacacagt ttacctgtga gaccacactc gactcttgcc agtgcaaact gccctcctcg
421 gagccgctca gcaggacctt tgtttaccgg gatgtgacgg actgtaccag cgtcactggc
481 actttcaaac tgttcttact catccagatg attcttaatt tggtctgcgg ccttgtgtgc
541 ttgttggcct gctttgtgat gtggaaacat aggtaccagg tcttctatgt gggtgtcagg
601 atatgctccc tcacggcttc cgaaggcccc cagcaaaaga tctaacattc ttgctcaaag
661 ttgcgagaga aagtagcaca tggagtagct gaggttaaac aaacaaaaaa aaattttaaa
721 caaagaaagg aaaaaaattg acaataaaag tcactcttct aattgaatat ttttatattt
781 ttatgaaaca aaagagcatt tcttcaggtt tctattgtat tttttttaac attcttgcag
841 agaaagcaag atccaaattg attttgggat attaaaagtt aacagaacac tgaacaagga
901 aagaatggca tagatctatc tttacagtct ggagttaatt cctgttaact cattttatcc
961 attccttaca taatcttctt tcctgttagt ccagtttgat ggtgtgaatg gtgaatttca
1021 ggcccagttg ctaaattttg tggcatcttc ctctagtcct tcccacctcc agtcatcagc
1081 cccactctgt cttggagaca ggcaggaggt gggggaagag ctgaatctct ttattttccc
1141 tggtagagac atcttcaagg catgaaatag cttaaagagc agagtagaaa cggaagaggc
1201 tttgcaaaag gctagataac taacaacacc tgggttgggg cggcggcctc ttctcttcag
1261 ctcccttagc ttggctccgt aagtggatca cttgccaaat gctttagatg attgcctctc
1321 aataattgaa aggtggtggt agttgtattc taaatgatgt agaaggttta aaaataatta
1381 cattatgctt ctattctatc atctaaaaca aatcattaaa actaatttct agctaattgt
1441 taattataat tatgctcaga agtctattta atgagctctg actgtactta cgctgcactg
1501 tcggtgttaa gagaaattac tctcacaaga gcagaggcct gaagattctt tcttctgaaa
1561 gccaagcacc acaaggaaaa aaaaattatt aatagctcag gttaaaaaca cccatttaaa
1621 caaaaacaag agcatttgta ataggaagtg tttatacaaa tagcacattt gtgatatgtt
1681 gaaaagcatc tctcttggca accaatctat gtttgaggaa gattgggtaa tgctgatgtg
1741 ttccattcat gaaactgtat ttgatacata atcctattat taattcgtat gcttagtcaa
1801 cctaggaaat caaaataatg ttttgaagtt cttatttgag caatatggcc ttgacttgga
1861 gggtagtttt agttgttttg tttttaagtg actgtggttt aaagcacaaa tgccccaagg
1921 tggggagact tctctctgtg attattgttg ctattaaatt ctgaactgta tccatatttt
1981 aaggaaggag ctaaaaatgg aaattcatga aacataaatg gtatcaagaa ctttatcagt
2041 atgctttgtt gaaagcagaa attaagataa taattgagtt caattcgcct ctccgcattg
2101 cctattgata cactttacta atcatgaaat tctaacctaa aaggaaaaca ttttcctgct
2161 tgtcttagaa gaaagtggaa taattccact gattgtgata atggtttcaa tttctacaca
2221 atataaatat ccagtataaa ggaaagcgtt aagtcggtaa gctagaggat tgtaaatatc
2281 ttttatgtcc tctagataaa acacccgatt aacagatgtt aaacctttta atgttttgat
2341 ttgctttaaa aatggccttc ctacacatta gctccagcta aaaagacaca ttggagagct
2401 tagaggataa gtctctggag cagaatttat cacacacaaa agttacacca acagaatacc
2461 aagcagaatg atgaggacct gtaaaatacc ttgtgcccta tt
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