LOCUS AK092764 1891 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ35445 fis, clone SMINT2003551, weakly similar
to Drosophila melanogaster La related protein (larp) mRNA.
ACCESSION AK092764
VERSION AK092764.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1891)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..1891
/clone="SMINT2003551"
/clone_lib="SMINT2"
/db_xref="H-InvDB:HIT000017631"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="small intestine"
CDS 168..>1891
/codon_start=1
/protein_id="BAC03970.1"
/translation="MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDS
KENRETKLNGPGENVSEDEAQSSNQRKRGWKRDREKRDDQDDVSSVRSEGGNIRGSFR
GRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQV
YPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTN
LNLILEVLKDSTEVEIVDEKMRKKIEPEKWPIPGPPPRSVPPTDFSQLIDCPEFVPGQ
AFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGLSTSLPDLDSEPWIEVKKRHQP
APVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIEQIGRKNTFTDWSDNDSDYE
IDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSQAKITSELAKVINDGLYYYEQDLWM
EEDENKHTAIKQEVENFKKLNLISKEQFENLTPELPFEPNQEVPVAPSQSRQDLTDEL
AQKLFDVSEITSAAMVHSLPTAVPESPRIHPTRTPKTPRTPRLQDPNKTPRFYPVVKE
PKAIDVKSP"
BASE COUNT 659 a 367 c 415 g 450 t
ORIGIN
1 agttaccagc tttggctgct cgcgcctccc caactcgggt aaagctcctc ggcctcggcg
61 tgctgcgcct ccgcggctgc cctgcgccag aattcggttc cctcaaaatt ataaaggcag
121 gaaagctcaa gacaaagaaa tccaacaagg ctagtgattt cagtgatatg gagaattggc
181 caacaccaag tgaattagtg aacactggat ttcagagcgt cctcagccaa ggaaataaaa
241 agccacaaaa tagaaaagaa aaagaagaga aggttgaaaa gagaagtaac agtgacagca
301 aagaaaaccg ggaaacaaaa ttaaatggtc ctggtgaaaa cgtcagtgag gatgaggctc
361 agtcaagtaa tcaacgtaag agaggttgga agcgagatag agaaaaaagg gatgatcaag
421 atgacgtttc cagtgtgaga agtgagggtg gtaatatccg aggttccttt agaggtcgag
481 gaagaggccg aggacgggga agaggacgag gcagaggaaa tcctcgattg aactttgatt
541 attcatatgg ttatcaagaa catggtgaaa ggactgatca accatttcaa acagaactta
601 ataccagtat gatgtattac tatgatgatg gtacaggtgt acaggtgtat cctgtggaag
661 aagcattgct taaagagtat attaagcgtc aaattgaata ttacttcagt gtagaaaatt
721 tggaacgaga cttctttctt cggggaaaga tggatgaaca aggtttcttg cctatttccc
781 tgattgctgg ttttcagcgt gttcaggctc tcactacaaa ccttaatctc atcttagagg
841 tactgaagga tagcacagaa gtagaaattg tggatgagaa aatgagaaaa aagatagaac
901 cagaaaaatg gccaattcca ggccctcctc cacgcagtgt gccaccaaca gacttctctc
961 aactgattga ttgtccagag tttgtaccag gccaagcctt ttgctcacat acagagtctg
1021 ccccaaattc tccaagaatt ggaagcccat tgagcccaaa gaaaaacagt gaaacaagta
1081 ttcttcaagc aatgtctaga ggtttgtcta ccagtttgcc tgacttggac tcagaacctt
1141 ggatagaagt taaaaaaaga catcagccag ccccagtgaa attgagggaa tcagtgtctg
1201 tccctgaagg gtcattaaat cagctatgtt cttcagaaga accagaacaa gaagaacttg
1261 attttttgtt tgatgaagag attgaacaaa taggacgaaa aaacacattt actgattggt
1321 ctgataatga ttcagattat gaaattgatg accaagactt aaacaagatt ttgattgtaa
1381 ctcagacacc accttatgtg aaaaaacatc ctggaggaga tcgaacaggc acccacatgt
1441 ctcaggcaaa aatcacatct gaacttgcta aagttatcaa tgatggctta tactattatg
1501 aacaggatct atggatggaa gaagatgaaa acaaacacac agccataaag caagaagttg
1561 agaactttaa gaagctaaat ctcattagta aagagcagtt tgaaaaccta acacctgaac
1621 ttccttttga gccaaaccaa gaagttcctg tagcaccttc acagtccagg caagatttga
1681 ctgatgaatt agctcagaag ttatttgatg tttcagaaat aacttcagca gcaatggttc
1741 attcgttgcc tacagcagtt ccagaatctc ctagaattca tcctacaaga acacccaaaa
1801 cacctcgaac acctaggtta caagatccta acaaaacacc aagattttat cctgttgtta
1861 aagaaccaaa agccattgat gtaaagagtc c
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