LOCUS AK092381 2915 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ35062 fis, clone OCBBF2019195, highly similar
to VERY LOW-DENSITY LIPOPROTEIN RECEPTOR PRECURSOR.
ACCESSION AK092381
VERSION AK092381.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2915)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Nishi,T., Ota,T., Nakagawa,S., Senoh,A., Mizuguchi,H., Inagaki,H.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2915
/clone="OCBBF2019195"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000017248"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 47..2305
/codon_start=1
/protein_id="BAC03874.1"
/translation="MGTSALWALWLLLALCWAPRESGATGTGRKAKCEPSQFQCTNGR
CITLLWKCDGDEDCVDGSDELDCAPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSD
ESLEQCGRQPVIHTKCPASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPD
QFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCN
QEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDI
DECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIG
LERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDNVY
NPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVY
WSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLYWLDSKLHMLSSVDL
NGQDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLND
AQDIIVYHELVQPSGKNWCEEDMENGGCEYLCLPAPQINDHSPKYTCSCPSGYNVEEN
GRDCQSTATTVTYSETKDTNTTEISATSGLVPGGINVTTAVSEVSVPPKGTSAAWAIL
PLLLLVMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYP
AISVVSTDDDLA"
BASE COUNT 831 a 628 c 712 g 744 t
ORIGIN
1 gtgcggagcg aacggcggcg gcggcggcac catccaggcg ggcaccatgg gcacgtccgc
61 gctctgggcg ctctggctgc tgctcgcgct gtgctgggcg ccccgggaga gcggcgccac
121 cggaaccggg agaaaagcca aatgtgaacc ctcccaattc cagtgcacaa atggtcgctg
181 tattacgctg ttgtggaaat gtgatgggga tgaagactgt gttgatggca gtgatgagct
241 ggactgtgcc ccgccaacct gtggcgccca tgagttccag tgcagcacct cctcctgcat
301 ccccatcagc tgggtatgcg acgatgatgc agactgctcc gaccaatctg atgagtccct
361 ggagcagtgt ggccgtcagc cagtcataca caccaagtgt ccagccagcg aaatccagtg
421 cggctctggc gagtgcatcc ataagaagtg gcgatgtgat ggggaccctg actgcaagga
481 tggcagtgat gaggtcaact gtccctctcg aacttgccga cctgaccaat ttgaatgtga
541 ggatggcagc tgcatccatg gcagcaggca gtgtaatggt atccgagact gtgtcgatgg
601 ttccgatgaa gtcaactgca aaaatgtcaa tcagtgcttg ggccctggaa aattcaagtg
661 cagaagtgga gaatgcatag atatcagcaa agtatgtaac caggagcagg actgcaggga
721 ctggagtgat gagcccctga aagagtgtca tataaacgaa tgcttggtaa ataatggtgg
781 atgttctcat atctgcaaag acctagttat aggctacgag tgtgactgtg cagctgggtt
841 tgaactgata gataggaaaa cctgtggaga tattgatgaa tgccaaaatc caggaatctg
901 cagtcaaatt tgtatcaact taaaaggcgg ttacaagtgt gaatgtagtc gtggctatca
961 aatggatctt gctactggcg tgtgcaaggc agtaggcaaa gagccaagtc tgatcttcac
1021 taatcgaaga gacatcagga agattggctt agagaggaaa gaatatatcc aactagttga
1081 acagctaaga aacactgtgg ctctcgatgc tgacattgct gcccagaaac tattctgggc
1141 cgatctaagc caaaaggcta tcttcagtgc ctcaattgat gacaaggttg gtagacatgt
1201 taaaatgatc gacaatgtct ataatcctgc agccattgct gttgattggg tgtacaagac
1261 catctactgg actgatgcgg cttctaagac tatttcagta gctaccctag atggaaccaa
1321 gaggaagttc ctgtttaact ctgacttgcg agagcctgcc tccatagctg tggacccact
1381 gtctggcttt gtttactggt cagactgggg tgaaccagct aaaatagaaa aagcaggaat
1441 gaatggattc gatagacgtc cactggtgac agcggatatc cagtggccta acggaattac
1501 acttgacctt ataaaaagtc gcctctattg gcttgattct aagttgcaca tgttatccag
1561 cgtggacttg aatggccaag atcgtaggat agtactaaag tctctggagt tcctagctca
1621 tcctcttgca ctaacaatat ttgaggatcg tgtctactgg atagatgggg aaaatgaagc
1681 agtctatggt gccaataaat tcactggatc agagctagcc actctagtca acaacctgaa
1741 tgatgcccaa gacatcattg tctatcatga acttgtacag ccatcaggta aaaattggtg
1801 tgaagaagac atggagaatg gaggatgtga atacctatgc ctgccagcac cacagattaa
1861 tgatcactct ccaaaatata cctgttcctg tcccagtggg tacaatgtag aggaaaatgg
1921 ccgagactgt caaagtactg caactactgt gacttacagt gagacaaaag atacgaacac
1981 aacagaaatt tcagcaacta gtggactagt tcctggaggg atcaatgtga ccacagcagt
2041 atcagaggtc agtgttcccc caaaagggac ttctgccgca tgggccattc ttcctctctt
2101 gctcttagtg atggcagcag taggtggcta cttgatgtgg cggaattggc aacacaagaa
2161 catgaaaagc atgaactttg acaatcctgt gtacttgaaa accactgaag aggacctctc
2221 catagacatt ggtagacaca gtgcttctgt tggacacacg tacccagcaa tatcagttgt
2281 aagcacagat gatgatctag cttgacttct gtgacaaatg ttgacctttg aggtctaaac
2341 aaataatacc cccgtcggaa tggtaaccga gccagcagct gaagtctctt tttcttcctc
2401 tcggctggaa gaacatcaag atacctttgc gtggatcaag cttgtgtact tgaccgtttt
2461 tatattactt ttgtaaatat tcttgtccac attctacttc agctttggat gtggttaccg
2521 agtatctgta acccttgaat ttctagacag tattgccacc tctggccaaa tatgcacttt
2581 ccctagaaag ccatattcca gcagtgaaac ttgtgctata gtgtatacca cctgtacata
2641 cattgtatag gccatctgta aatatcccag agaacaatca ctattcttaa gcactttgaa
2701 aatatttcta tgtaaattat tgtaaacttt ttcaatggtt gggacaatgg caataggaca
2761 aaacgggtta ctaagatgaa attgccaaaa aaatttataa actaattttg tacgtatgaa
2821 tgatatcttt gacctcaatg gaggtttgca aagactgagt gttcaaacta ctgtacattt
2881 tttttcaagt gctaaaaaat taaaccaagc agctt
//