LOCUS AK092241 4769 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ34922 fis, clone NT2RP7003084, weakly similar
to Mus musculus schlafen3 (Slfn3) mRNA.
ACCESSION AK092241
VERSION AK092241.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4769)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..4769
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7003084"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000017108"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 278..2983
/codon_start=1
/protein_id="BAC03835.1"
/translation="MEANQCPLVVEPSYPDLVISVGEVTLGEENRKKLQKIQRDQEKE
RVMRAACALLNSGGGVIRMAKKVEHPVEMGLDLEQSLRELIQSSDLQAFFETKQQGRC
FYIFVKSWSSGPFPEDRSFKPRLCSLSSSLYRRSETSVRSTDSREAFCFLKTKRKPKI
LEEGPFHKIHKGVYQELPNSDPADPNSDPADLIFQKDYLEYGEILPFPESQLVEFKQF
STKHFQEYVKRTIPEYVPAFANTGGGYLFIGVDDKSREVLGCAKENVDPDSLRRKIEQ
AIYKLPCVHFCQPQRPITFTLKIVDVLKRGELYGYACMIRVNPFCCAVFSEAPNSWIV
EDKYVCSLTTEKWVGMMTDTDPDLLQLSEDFECQLSLSSGPPLSRPVYSKKGLEHKKE
LQQLLFSVPPGYLRYTPESLWRDLISEHRGLEELINKQMQPFFRGILIFSRSWAVDLN
LQEKPGVICDALLIAQNSTPILYTILREQDAEGQDYCTRTAFTLKQKLVNMGGYTGKV
CVRAKVLCLSPESSAEALEAAVSPMDYPASYSLAGTQHMEALLQSLVIVLLGFRSLLS
DQLGCEVLNLLTAQQYEIFSRSLRKNRELFVHGLPGSGKTIMAMKIMEKIRNVFHCEA
HRILYVCENQPLRNFISDRNICRAETRKTFLRENFEHIQHVVIDEAQNFRTEDGDWYG
KAKSITRRAKGGPGILWIFLDYFQTSHLDCSGLPPLSDQYPREELTRIVRNADPIAKY
LQKEMQVIRSNPSFNIPTGCLEVFPEAEWSQGVQGTLRIKKYLTVEQIMTCVADTCRR
FFDRGYSPKDVAVLVSTAKEVEHYKYELLKAMRKKRVVQLSDACDMLGDHIVLDSVRR
FSGLERSIVFGIHPRTADPAILPNVLICLASRAKQHLYIFPWGGH"
BASE COUNT 1308 a 1033 c 1103 g 1325 t
ORIGIN
1 cagaaaacgc taagggggct tcggaagcgc tggagcttga gaggtttctg tatacatagc
61 cttcaggact gcttttggtg gaaagagata gcaggtggtg ctaattcact gtgttggtgg
121 gaactctggc tacactgaaa gattcttact ttgaccccca ggctggagtg cagtggcacg
181 atcttggttc accacaatct cgtctcgaag gctcaggtga ttctctcacc tcagccgcct
241 gagtagctgg gaccacagtt tcagctgtga gttcaacatg gaggcaaatc agtgccccct
301 ggttgtggaa ccatcttacc cagacctggt catcagtgta ggagaagtga ctcttggaga
361 agaaaacaga aaaaagctgc agaaaattca gagagaccaa gagaaggaga gagttatgcg
421 ggctgcatgt gctttattaa actcaggagg aggagtgatt cgaatggcca agaaggttga
481 gcatcccgtg gagatgggac tggatttaga acagtctttg agagagctta ttcagtcttc
541 agatctgcag gctttctttg agaccaagca acaaggaagg tgtttttaca tttttgttaa
601 atcttggagc agtggccctt tccctgaaga tcgctctttc aagccccgcc tttgcagcct
661 cagttcttca ttataccgta gatctgagac ctctgtgcgt tccacggact caagagaggc
721 attctgtttc ctgaagacca aaaggaagcc aaaaatcttg gaagaaggac cttttcacaa
781 aattcacaag ggtgtatacc aagagctccc taactcggat cctgctgacc caaactcgga
841 tcctgctgac ctaattttcc aaaaagacta tcttgaatat ggtgaaatcc tgccttttcc
901 tgagtctcag ttagtagagt ttaaacagtt ctctacaaaa cacttccaag aatatgtaaa
961 aaggacaatt ccagaatacg tccctgcatt tgcaaacact ggaggaggct atctttttat
1021 tggagtggat gataagagta gggaagtcct gggatgtgca aaagaaaatg ttgaccctga
1081 ctctttgaga aggaaaatag aacaagccat atacaaacta ccttgtgttc atttttgcca
1141 accccaacgc ccgataacct tcacactcaa aattgtggat gtgttaaaaa ggggagagct
1201 ctatggctat gcttgcatga tcagagtaaa tcccttctgc tgtgcagtgt tctcagaagc
1261 tcccaattca tggatagtgg aggacaagta cgtctgcagc ctgacaaccg agaaatgggt
1321 aggcatgatg acagacacag atccagatct tctacagttg tctgaagatt ttgaatgtca
1381 gctgagtcta tctagtgggc ctccccttag cagaccagtg tactccaaga aaggcctgga
1441 acataaaaag gaactccagc aacttttatt ttcagtccca ccaggatatt tgcgatatac
1501 tccagagtca ctctggaggg acctgatctc agagcacaga ggactagagg agttaataaa
1561 taagcaaatg caacctttct ttcggggaat tttgatcttc tctagaagtt gggctgtgga
1621 cctgaacttg caggagaagc caggagtcat ctgtgatgct ctgctgatag cacagaacag
1681 cacccccatt ctctacacca ttctcaggga gcaggatgca gagggccagg actactgcac
1741 tcgcactgcc tttactttga agcagaagct agtgaacatg gggggctaca ccgggaaggt
1801 gtgtgtcagg gccaaggtcc tctgcctgag tcctgagagc agcgcagagg ccttggaggc
1861 tgcagtgtct ccgatggatt accctgcgtc ctatagcctt gcaggcaccc agcacatgga
1921 agccctgctg cagtccctcg tgattgtctt actcggcttc aggtctctct tgagtgacca
1981 gctcggctgt gaggttttaa atctgctcac agcccagcag tatgagatat tctccagaag
2041 cctccgcaag aacagagagt tgtttgtcca cggcttacct ggctcaggga agaccatcat
2101 ggccatgaag atcatggaga agatcaggaa tgtgtttcac tgtgaggcac acagaattct
2161 ctacgtttgt gaaaaccagc ctctgaggaa ctttatcagt gatagaaata tctgccgagc
2221 agagacccgg aaaactttcc taagagaaaa ctttgaacac attcaacacg tcgtcattga
2281 cgaagctcag aatttccgta ctgaagatgg ggactggtat gggaaggcaa aaagcatcac
2341 tcggagagca aagggtggcc caggaattct ctggatcttt ctggattact ttcagaccag
2401 ccacttggat tgcagtggcc tccctcctct ctcagaccaa tatccaagag aagagctcac
2461 cagaatagtt cgcaatgcag atccaatagc caagtactta caaaaagaaa tgcaagtaat
2521 tagaagtaat ccttcattta acatccccac tgggtgcctc gaggtatttc ctgaagccga
2581 atggtcccag ggtgttcagg gaaccttacg aattaagaaa tacttgactg tggagcaaat
2641 aatgacctgt gtggcagaca cgtgcaggcg cttctttgat aggggctatt ctccaaagga
2701 tgttgctgtg cttgtcagca ccgcaaaaga agtggagcac tataagtatg agctcttgaa
2761 agcaatgagg aagaaaaggg tggtgcagct cagtgatgca tgtgatatgt tgggtgatca
2821 cattgtgttg gacagtgttc ggcgattctc aggcctggaa aggagcatag tgtttgggat
2881 ccatccaagg acagctgacc cagctatctt acccaatgtt ctgatctgtc tggcttccag
2941 ggcaaaacaa cacctgtata tttttccgtg gggtggccat taggaagaac tccaaatcaa
3001 aatgctatgt aaatgtctat gggtgacagt ctgctgatgg tagaaacctt tctttttagt
3061 tcacaagtca gagatttgga cggagctgac acaaagagtt tggagctccc ccatttctgg
3121 ctctcctttc aggggttcct tccccaaccc ttttcagcag cggtggctgc cccccattct
3181 gacccctgac tcttccagcc agaaagatgg tggttttcta aaggaacttt agctgtcctg
3241 cacaatgccg atctgtgtct tgcattttgg gtaaaagcca taaaaataag aaactcagcc
3301 tgtggccttt ctttcttcca aggctgggct tcttttttta agtgacttca tgcagtttgt
3361 tgcttttaaa aatttgtcca gaatcgtttt ctgcagaagc atggtctgtt aggagcttac
3421 tggccgtagc agaagcaatt gtttcctgaa ttcttgacat ttatctttgc tgtattcatt
3481 tagggcttgg gagagtccga agataattca gtcactgtca gattaataat tttgtcagga
3541 caaagaatac cgttatgatt atttaatcct ttaaaattgt ggtctccaga gcttgttctc
3601 agaatggccc agaccaagcc ttaattgtga tagtgaatat taatggtcac tttaaggaga
3661 aattataggc caagatgaaa tgaacataaa cctgtttgcc ctggctttca gtggaagatg
3721 atattagaga ccaaaatctg gttctgaagg tgtgtatcag ccctaaggtg aaccagactt
3781 gggaaagatt gtctttaaaa atcaatgagt ttatgtttta acttctcagc ttagttctat
3841 gcattgctct ataacacacc tagttaagtt ttatgttatt cttgaactgt gatttttttt
3901 ctatttactt tcatggtttg gtgggccatt gttatggact gaatgtttgt gtcccaccct
3961 tcacccccaa attcccgtgt tgaagcccca acctgcactg tggagctggg gctgctaagg
4021 aagtaattaa ggttacatga agtcatggtg gggctctgat ctgctaaggt tggtgtcctt
4081 atagggagag accccagaga gcttgttccc tccctccctg tgcatgcaaa caagagggca
4141 tgggagcaca cagagagatg gcagccacct acaagccaag aggagaagcc tcacaatcaa
4201 actctcgctg ctggcgagag tcttggactc tgtcttggac ttccagcctc cagactgtga
4261 gaaacaaatt tctgttgttt cagcttctca gtctctggtg ttttgttatt gcagcctgag
4321 aacacagctg tacgattatt tgtcaaacag aaaacactga cacttaacaa tgctaatgca
4381 attatttatt tgcttttcag tctctacaaa acgttctaaa acactaatct aaatattaac
4441 agtaaaatat ttgcataact aatggaaact aagaaatcat atgaccaata tttcacttat
4501 tggtaatctt actctactga tttcccccca gactgtgatt tttgaacttc cttgcctttc
4561 tcctgtcttt ctgtgtttat tcatggaatt ccagttatct gggcttgaaa ttgcaggctc
4621 tcctaactta agcaaaatct gacagatcag caaaatgaga taaatgtttc ttttttcttt
4681 ctgactgcat taaatcagat acaactcagc attaaaaagc tatctttgta aatgttgtta
4741 ctaataaatt agtcttataa gatccctgg
//