LOCUS AK092121 1943 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ34802 fis, clone NT2NE2006427, highly similar
to Synaptotagmin-like protein 2.
ACCESSION AK092121
VERSION AK092121.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1943)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..1943
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2006427"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000016988"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 377..1474
/codon_start=1
/note="highly similar to Synaptotagmin-like protein 2"
/protein_id="BAG52485.1"
/translation="MSDDRETDTASESSYQLSRHKKSPSSLTNLSSSSGMTSLSSVSG
SVMSVYSGDFGNLEVKGNIQFAIEYVESLKELHVFVAQCKDLAAADVKKQRSDPYVKA
YLLPDKGKMGKKKTLVVKKTLNPVYNEILRYKIEKQILKTQKLNLSIWHRDTFKRNSF
LGEVELDLETWDWDNKQNKQLRWYPLKRKTAPVALEAENRGEMKLALQYVPEPVPGKK
LPTTGEVHIWVKECLDLPLLRGSHLNSFVKCTILPDTSRKSRQKTRAVGKTTNPIFNH
TMVYDGFRPEDLMEACVELTVWDHYKLTNQFLGGLRIGFGTGKSYGTEVDWMDSTSEE
VALWEKMVNSPNTWIEATLPLRMLLIAKISK"
BASE COUNT 601 a 388 c 456 g 498 t
ORIGIN
1 acagaagaat agagaggctg ttgcagcccc gtgctttctc ctgctgctgg ccgattgctt
61 gctctgaact aaccctctaa cccttgggag tctgtgtgca gcagtgatgt gagctgcatc
121 cgggctgaaa tgggagctcc cgctatggca ctggctcaag gagctaatct aaagagaaag
181 tattttgggg aagacatctt ggttgcaccc ctcattgcat cttgactaat tgcttccaac
241 tccgggggct tccagggaca atctcattgt tcttttctct ccaagggtca gccatgttaa
301 ccatttgtta atttcttctg aacagatcaa gcaaaagtag ataatcagcc agaagaatta
361 gtgcgtagtg ctgaagatga gtgatgacag agaaacagat acagcatcag aaagcagtta
421 ccagctcagc agacacaaga agagcccgag ctctttaacc aatcttagca gctcctctgg
481 catgacgtcc ttgtcttctg tgagtggcag tgtgatgagt gtttatagtg gagactttgg
541 caatctggaa gttaaaggaa atattcagtt cgcaattgaa tatgtggagt cactgaagga
601 gttgcatgtt tttgtggccc agtgtaagga cttagcagca gcggatgtaa aaaaacagcg
661 ttcagaccca tatgtaaagg cctatttgct accagacaaa ggcaaaatgg gcaagaagaa
721 aacactcgta gtgaagaaaa ccttgaatcc tgtgtataac gaaatactgc ggtataaaat
781 tgaaaaacaa atcttaaaga cacagaaatt gaacctgtcc atttggcatc gggatacatt
841 taagcgcaat agtttcctag gggaggtgga acttgatttg gaaacatggg actgggataa
901 caaacagaat aaacaattga gatggtaccc tctgaagcgg aagacagcac cagttgccct
961 tgaagcagaa aacagaggtg aaatgaaact agctctccag tatgtcccag agccagtccc
1021 tggtaaaaag cttcctacaa ctggagaagt gcacatctgg gtgaaggaat gccttgatct
1081 accactgcta aggggaagtc atctaaattc ttttgttaaa tgtaccatcc ttccagatac
1141 aagtaggaaa agtcgccaga agacaagagc tgtagggaaa accaccaacc ctatcttcaa
1201 ccacactatg gtgtatgatg ggttcaggcc tgaagatctg atggaagcct gtgtagagct
1261 tactgtctgg gaccattaca aattaaccaa ccaatttttg ggaggtcttc gtattggctt
1321 tggaacaggt aaaagttatg ggactgaagt ggactggatg gactctactt cagaggaagt
1381 tgctctctgg gagaagatgg taaactcccc caatacttgg attgaagcaa cactgcctct
1441 cagaatgctt ttgattgcca agatttccaa atgagcccaa attccactgg ctcctccact
1501 gaaaactact aaaccggtgg aatctgatct tgaaaatctg agtaggtgga caaatatcct
1561 cactttctat ctattgcacc taaggaatac tacacagcat gtaaaagtca atctgcatgt
1621 gcttctttga ttacaaggcc caagggattt aaatataaca aaatgtgtaa tttgtgactc
1681 taatattaaa taagatattt gaacaagcta ggaaaattga atttctgctg ctgcttcaaa
1741 gaaaaagctg ccccagagca ttaaacatgg ggtattgtta agaagcaaaa tgttcttgtt
1801 tgccatcatg tgtttcacac cacaattctg tgccacagtt aagagggtct ggtacccttg
1861 caggaccttt gtaggttgtg ggaaaaagtc gcagaaagat actcaaagtg gagcagggaa
1921 tggagacaga catcagtgat gat
//