LOCUS AK091444 3490 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ34125 fis, clone FCBBF3010012, moderately
similar to Mus musculus semaphorin cytoplasmic domain-associated
protein 3A (Semcap3) mRNA.
ACCESSION AK091444
VERSION AK091444.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3490)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Matsuo,K.,
Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3490
/clone="FCBBF3010012"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000016311"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 8..2305
/codon_start=1
/protein_id="BAC03666.1"
/translation="MCVVQKPEEQYKVMLQVNGKELSKLSQEQTLQALRSSKEPLVIQ
VLRRSPRLRGDSSCHDLQLVDSGTQTDITFEHIMALGKLRPPTPPMVILEPPPISHEY
YDPAEFMEGGPQEADRLDELEYEEVELYKSSHRDKLGLMVCYRTDDEEDLGIYVGEVN
PNSIAAKDGRIREGDRIIQINGVDVQNREEAVAILSQEENTNISLLVARPESQLAKRW
KDSDRDDFLDDFGSENEGELRARKLKSPPAQQPGNEEEKGAPDAGPGLSNSQELDSGV
GRTDESTRNEESSEHDLLGDEPPSSTNTPGSLRKFGLQGDALQSRDFHFSMDSLLAEG
AGLGGGDVPGLTDEEYERYRELLEIKCHLENGNQLDLLFPRASGGNSALDVNRNESLG
HEMAMLEEELRHLEFKCRNILRAQKMQQLRERCMKAWLLEEESLYDLAASEPKKHELS
DISELPEKSDKDSTSAYNTGESCRSTPLLVEPLPESPLRRAMAGNSNLNRTPPGPAVA
TPAKAAPPPGSPAKFRSLSRDPEAGRRQHAEERGRRNPKTGLTLERVGPESSPYLSRR
HRGQGQEGEHYHSCVQLAPTRGLEELGHGPLSLAGGPRVGGVAAAATEAPRMEWKVKV
RSDGTRYVAKRPVRDRLLKARALKIREERSGMTTDDDAVSEMKMGRYWSKEERKQHLI
RAREQRKRREFMMQSRLECLREQQNGDSKPELNIIALSHRKTMKKRNKKILDNWITIQ
EMLAHGARSADGKRVYNPLLSVTTV"
BASE COUNT 719 a 1045 c 1175 g 551 t
ORIGIN
1 gtgtaatatg tgcgtggtcc agaaaccgga ggagcagtac aaagtgatgc tgcaggtgaa
61 cgggaaggag ctctccaagc tgtctcagga gcaaactctg caggccctgc gctcctccaa
121 ggagcccctg gtgatccagg tgctgagacg cagcccccgc ctccgggggg acagctcctg
181 tcacgacctg cagctggtgg acagtggcac tcagaccgac atcaccttcg agcatatcat
241 ggcgctgggc aagctgcgtc cgcccacccc gcccatggtc atcctggagc cccccccaat
301 cagccatgag tattatgacc cggcggagtt tatggagggc ggcccgcagg aggcagaccg
361 cttggatgag ctggagtatg aggaggtgga gctgtataaa agcagccacc gggacaagct
421 gggcctgatg gtttgctacc gcacggacga cgaggaggac ctgggcattt atgtcggaga
481 ggtaaatccc aacagcattg cagccaaaga cggccggatc cgtgagggag accgcatcat
541 ccagattaac ggtgtagacg tccagaaccg ggaagaggcg gtggccatcc tgagccagga
601 agagaacacc aacatctccc tgctggtggc ccgacctgag agtcagctgg cgaaaaggtg
661 gaaggacagc gaccgggatg acttcctgga tgactttggc tctgagaatg agggggagct
721 gcgtgctcgt aaactgaaat caccccctgc ccagcagccc ggaaacgaag aggagaaggg
781 ggctcccgat gccggcccag gcctgagcaa cagccaggag ctggacagcg gggtgggccg
841 gactgacgag agcacccgga acgaagagag ctctgagcac gacctgctgg gggacgaacc
901 cccgagctcc accaacaccc cgggaagcct gcgcaagttt ggcctgcaag gggacgccct
961 gcagagccgg gacttccatt tcagcatgga ctctctgctg gccgaggggg cggggctggg
1021 agggggcgac gtcccgggcc tcacggatga ggagtatgag cgctaccgtg agctcctgga
1081 gatcaagtgc cacctggaga acggcaacca gctggacctc ctctttcccc gggcctccgg
1141 aggcaacagc gccctggacg tcaaccgcaa cgagagcctg ggccacgaga tggccatgct
1201 ggaggaggag ctaaggcacc tggaattcaa gtgccgcaac atactgcggg cgcagaagat
1261 gcagcagctg cgtgagcgct gcatgaaggc ctggctgctg gaggaggaga gcctctacga
1321 cctggcggcc agcgagccca agaagcacga gctgtccgac atctccgagc tgcccgagaa
1381 gtcggacaag gacagcacca gcgcctacaa cactggggag agctgccgca gcaccccgct
1441 gcttgtggag cccctgcccg agagccccct gcggcgggcc atggccggca actccaactt
1501 gaaccggacc cctcccggcc ccgctgttgc cacccccgcc aaggcagctc ctccaccggg
1561 gagccccgcc aagttccggt ccctctcccg ggatcctgag gccggccgga ggcagcacgc
1621 ggaggagcgc ggccgccgca accccaagac ggggttgacc ctggagcgtg tgggccctga
1681 aagcagccct tacctctcgc ggcgccaccg cggccagggc caggagggcg agcactacca
1741 cagctgcgtg cagctggccc cgacgcgagg cctggaggag ctgggccacg gccccctgag
1801 cttggccggt ggccctcggg tgggcggggt ggcggccgcg gccactgaag caccgcgcat
1861 ggagtggaaa gtgaaggtgc gcagcgacgg aacccgctac gtggccaagc ggcccgtgcg
1921 agatcggctg ctgaaagccc gtgccctgaa gatccgggag gagcgcagcg gtatgacgac
1981 cgacgacgac gcggtgagcg agatgaagat gggccgctac tggagcaagg aggagcggaa
2041 gcagcacctg atccgggccc gtgagcagcg gaagcggcgc gagttcatga tgcagagccg
2101 gctggagtgc ctgcgggagc agcagaatgg cgacagcaag cccgagctca acatcattgc
2161 cctgagccac cgcaaaacca tgaagaagcg gaacaagaag atcctggaca actggatcac
2221 catccaggag atgctggccc acggcgcgcg ctccgccgat ggcaagcggg tctacaaccc
2281 tcttctctca gtcaccaccg tgtgagctgc ccgggcgggt acacggccca ggcccaggga
2341 accccctggg gccccggccc tcactctcct atagagattg tgtgtgtgtg tgtgtgcgcg
2401 cgcgcgtgct cgctgtgcgc acgcacacat ctcctcgtct gggtgtgcgc acagggcttt
2461 gttagcagag agaagcccct gaggagaagg gacgcttttc ttccttctgc ccaagtaaag
2521 tgaccatgcc agtggccagc actgggggca cacctgtgat gggcacccct tcagctgtgc
2581 gtgtgcattc cccatccccc atgctcttgc gtgtgcttgc acgtgcacgc acacacacac
2641 ccagtgctct ctccacccga cccgtgtact tgcagacagg gaagctgagc tgaaaggagc
2701 acaagagagt gtccggcttc gctgctgagc gcggcctctc cccgccgctg cgcactgcag
2761 ttatttgtag acaaaggcac ccctgatttt tgtggttttt ctccctttct gtgcttgcca
2821 atagttgttt tgttttgtgg acctgccctg ggggctggca gctccttcag gcagcctggc
2881 agaagtggaa ctcccctctc cactgatggc tgggaaggga gttggggagg aagagtggga
2941 gggagggctg gggatggatg ggagggaagg ggagggaaag gtgggaggaa tgggaagcag
3001 ctgttctggt ggcttccact ctgaggtgtg ggaacgggga gcctctgggg ggcacctgtt
3061 tccccagtga ctcagagaga gcaagactgc aggaacggag gggtcctgca gggtgtccac
3121 caagaagtca cagagcccgt tctgcgcccc acaccatctg gagcaggggc ttctcttctg
3181 agtgaactga ggaaggtgct tagatggtga gggctctaga aaccaagccc catgagcagc
3241 agtggaagac ctcgggccat gcggcctggg gaggacttgg tggcgatccg caacctggac
3301 cccagtgaga ggcggtgggc tgactgggaa ggagaggccc ccaacctcct caggatttgc
3361 acgtgtgaac taggctgcct gtggggtgcc ccttaggctt ggagagcccc agattggagg
3421 cagacagact gcaccacccc ttccccccct gcatctcaag aataaagcaa gctgcctttg
3481 tacttggttg
//