LOCUS AK091405 2875 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ34086 fis, clone FCBBF3005320, highly similar
to Double-stranded RNA-binding protein Staufen homolog 1.
ACCESSION AK091405
VERSION AK091405.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2875)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2875
/clone="FCBBF3005320"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000016272"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 241..1338
/codon_start=1
/note="highly similar to Double-stranded RNA-binding
protein Staufen homolog 1"
/protein_id="BAG52352.1"
/translation="MKNFVTKVSVGEFVGEGEGKSKKISKKNAAIAVLEELKKLPPLP
AVERVKPRIKKKTKPIVKPQTSPEYGQGINPISRLAQIQQAKKEKEPEYTLLTERGLP
RRREFVMQVKVGNHTAEGTGTNKKVAKRNAAENMLEILGFKVPQAQPTKPALKSEEKT
PIKKPGDGRKVTFFEPGSGDENGTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGV
SQGHHTKDFTRAAPNPAKATVTAMIARELLYGGTSPTAETILKNNISSGHVPHGPLTR
PSEQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAA
LNILKLLSELDQQSTEMPRTGNGPMSVCGRC"
BASE COUNT 832 a 652 c 661 g 730 t
ORIGIN
1 aatggcaaag gaaagacaag acaggctgcg aaacacgatg ctgctgccaa agcgttgagg
61 atcctgcaga atgagcccct gccagagagg ctggaggtga atggaagaga atccgaagaa
121 gaaaatctca ataaatctga aataagtcaa gtgtttgaga ttgcacttaa acggaacttg
181 cctgtgaatt tagagtcttt ccctctgaaa caggtggccc gggagagtgg cccaccccac
241 atgaagaact ttgtgaccaa ggtttcggtt ggggagtttg tgggggaagg tgaagggaaa
301 agcaagaaga tttcaaagaa aaatgccgcc atagctgttc ttgaggagct gaagaagtta
361 ccgcccctgc ctgcagttga acgagtaaag cctagaatca aaaagaaaac aaaacccata
421 gtcaagccac agacaagccc agaatatggc caggggatca atccgattag ccgactggcc
481 cagatccagc aggcaaaaaa ggagaaggag ccagagtaca cgctcctcac agagcgaggc
541 ctcccgcgcc gcagggagtt tgtgatgcag gtgaaggttg gaaaccacac tgcagaagga
601 acgggcacca acaagaaggt ggccaagcgc aatgcagccg agaacatgct ggagatcctt
661 ggtttcaaag tcccgcaggc gcagcccacc aaacccgcac tcaagtcaga ggagaagaca
721 cccataaaga aaccagggga tggaagaaaa gtaacctttt ttgaacctgg ctctggggat
781 gaaaatggga ctagtaataa agaggatgag ttcaggatgc cttatctaag tcatcagcag
841 ctgcctgctg gaattcttcc catggtgccc gaggtcgccc aggctgtagg agttagtcaa
901 ggacatcaca ccaaagattt taccagggca gctccgaatc ctgccaaggc cacggtaact
961 gccatgatag cccgagagtt gttgtatggg ggcacctcgc ccacagccga gaccatttta
1021 aagaataaca tctcttcagg ccacgtaccc catggacctc tcacgagacc ctctgagcaa
1081 ctggactatc tttccagagt ccagggattc caggttgaat acaaagactt ccccaaaaac
1141 aacaagaacg aatttgtatc tcttatcaat tgctcctctc agccacctct gatcagccat
1201 ggtatcggca aggatgtgga gtcctgccat gatatggctg cgctgaacat cttaaagttg
1261 ctgtctgagt tggaccaaca aagtacagag atgccaagaa caggaaacgg accaatgtct
1321 gtgtgtggga ggtgctgaac cttttctggc catgaaccat tacaaaatcc caacatatat
1381 actgaaaata ctgaaactgc tttgaaaatt tggaatttct gatacctcca gtgggccgag
1441 agacacggtg ggtaaaggat gtgggcagca gcagggaaga caacagaaac acaaggaggc
1501 ggctgtggcc gggctggact gtgctggggt ttgttgtgat ggccactcgg tgacctggcg
1561 gtccctacgc aatagcagct gcctgtgggg aagaagggct gcccagccag ctggttctcc
1621 cgggacacca gcagatccac accctgggca cctccgtgtt tggtcttttt tttcccctgt
1681 gtgaaagaag aaacggcacg accccttctc aagctggctc actcagacac attgggacaa
1741 accctggaca gccatgccag agagaggcct ttgaccggcc ccagagctaa aagcaccaga
1801 gaaaatcaaa tgcttcctac tcagcgtgac ccaacttttc tagtgtgcca cggccccacc
1861 acctcctgca gtacccacac catcaccact gctttctctt ccaacagtga tctgtattct
1921 tagtttcatt attttctttt gattgatatg acactatata aaattttcat ttgagaattt
1981 ctcaattgta tctagttaaa tagcacagtt tggaaacttg tctgagactg actttatcaa
2041 taatctaacc gacaaagatc atatccatgt gtatgtggtt agacattttt atttcattga
2101 ctaacccagg acagtttcag tgatgcaaat tgtgtgccct ctggttcagc tgaaacagtc
2161 ctggactttc aaaaaccttg aataagtctc ccacagttgt ataaattgga caatttagga
2221 attttaaact ttagatgatc atttggttcc atttttattt catttttatt tttgttaatg
2281 caaacaggac ttaaatgaac tttgatctct gttttaaaga ttattaaaaa acattgtgta
2341 tctatacata tggctctcga ggacttagct ttcactacac tacaggatat gatctccatg
2401 tagtccatat aaacctgcag agtgattttc cagagtgctc gatactgtta attacatctc
2461 cattagggct gaaaagaatg acctacgttt ctgtatacag ctgtgttgct tttgatgttg
2521 tgttactgta cacagaagtg tgtgcactga ggctctgcgt gtggtccgta tggaaagcct
2581 ggtagccctg cgagttaagt actgcttcca ttcattgttt acgctggaat ttttctcccc
2641 atggaatgta agtaaaactt aagtgtttgt catcaataaa tggtaatact aaattttttt
2701 gttaatttat tctcaaatgc cactactgct aggttggtcc cctcccaact tgcccctatc
2761 ctttttttat ttttaagaaa aaaactttgt aatgcttgtg attccatctg ggcaaaagtc
2821 tgaagatctg aaataacttt atatcaaacc attgatcaat aaacagctac taatg
//