LOCUS AK091334 2166 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ34015 fis, clone FCBBF2002349, highly similar
to Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 40 (DHX40),
mRNA.
ACCESSION AK091334
VERSION AK091334.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2166
/clone="FCBBF2002349"
/clone_lib="FCBBF2"
/db_xref="H-InvDB:HIT000016201"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 64..1779
/codon_start=1
/note="highly similar to Homo sapiens DEAH
(Asp-Glu-Ala-His) box polypeptide 40 (DHX40), mRNA"
/protein_id="BAG52339.1"
/translation="MSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDREN
TAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTL
DGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQ
LNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEI
KRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGL
SMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRE
LAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRGLIRKL
KQQSDFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSAL
HEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVR
EDARRRWTNKENVKQLKDGISKDVLKKMQRRNDDKSISDARARFLERKQQRTQDHSDT
RKETG"
BASE COUNT 680 a 394 c 491 g 601 t
ORIGIN
1 ttattgaaga agctatttca ggagaagtct cctaatagga aggagcattt aaaagtggtg
61 gtaatgtcag caactatgga attagccaag ctctctgcat tctttggaaa ttgtccaata
121 tttgatatac ctggaaggct ttatccagtc agagagaaat tctgcaattt gattggtcca
181 cgagacagag aaaatactgc gtatattcaa gcgattgtga aagtcaccat ggatatccat
241 ttgaatgaaa tggctggaga catcttggtt tttctgactg gccagtttga aatagaaaaa
301 agttgtgagt tactttttca gatggcagag tctgttgatt atgattatga tgttcaagat
361 accaccctcg atggcttgtt aatattgccg tgttatggat caatgacaac agatcaacag
421 aggaggatat ttttgccacc accacctgga attagaaaat gtgtcatatc caccaatatt
481 tctgcaacgt ctttgacaat agatggaatc agatatgtgg tagatggtgg cttcgtgaag
541 cagttaaatc acaaccccag attagggttg gacatcctgg aggtggttcc aatttcaaag
601 agcgaggcat tacagcgaag tggccgagct ggcaggactt cttcaggaaa atgctttcgg
661 atctatagta aagatttttg gaaccagtgt atgcctgacc atgtgatccc tgaaattaag
721 agaactagtt tgacatctgt agttctgacc ttaaagtgcc ttgccataca cgatgtcata
781 aggtttccct atttggatcc acctaatgag agacttattt tagaagctct taaacaactt
841 taccagtgtg atgctattga caggagtggc catgtcacca gattgggttt gtctatggtg
901 gagtttcctt tgcctccaca tctgacatgt gcagtaataa aagctgcttc cctggattgt
961 gaagatctac tacttccaat agcagcaatg ttgtctgtgg aaaacgtctt cattagacct
1021 gttgatccag agtaccagaa ggaagcagaa cagagacatc gagaattggc agctaaagct
1081 ggaggattta atgactttgc aactttagct gtcatctttg aacaatgcaa atcaagtgga
1141 gctccagctt catggtgcca aaaacactgg attcattgga ggtgcttatt ttctgcattt
1201 cgtgtggaag ctcaacttcg aggactaatc aggaagctta aacagcaaag tgatttccca
1261 aaagagacct ttgaaggccc taaacatgaa gtactacgaa gatgtctttg tgcgggctat
1321 ttcaaaaatg tagctcgaag atctgttggg agaacgtttt gcacaatgga tggtcgtgga
1381 agcccagttc acattcatcc ttcctcagca cttcatgaac aggaaaccaa acttgaatgg
1441 atcatttttc atgaggtatt ggttaccacc aaagtctacg caagaattgt atgcccaatc
1501 cgttatgaat gggtaagaga cttgttaccc aagttgcatg aatttaatgc acatgatttg
1561 agcagtgtgg cccgacgtga agtgagagaa gatgcaagaa ggagatggac aaataaggaa
1621 aatgtaaagc agctaaagga tggaatatcg aaagacgtct taaagaaaat gcaaagaaga
1681 aatgatgaca aatccatatc tgatgcacgg gctcgtttcc ttgagagaaa gcagcagagg
1741 acccaggacc acagtgacac acgaaaggaa acaggctaag gtggtgaacc ctccaattca
1801 ggaagtggga aaaggagcca ggaaatgtgc ttctactttg ccagttattt cagacagcac
1861 taccaagagg aggtggtcag cacttgttat tggcctatga actaaaagca aatcaaagct
1921 cataaatcaa agctcatcag ttcccataga tgcagttgtc aaagaaaaga tttggttgcc
1981 atagtcataa gcaatgatac atgaaaccaa tgaaagacag tacatgtaat aatattttcc
2041 tcagtacaat tttgctggcc ttaactggta tcaaacgctg tcattgagat gttttcaaag
2101 aacattgagt tgtatttaat cagcgtgtac tccatttgca ttgaagcatt aaaaattatt
2161 tttctt
//