LOCUS AK090820 2966 bp mRNA linear HUM 03-JUL-2008 DEFINITION Homo sapiens cDNA FLJ33501 fis, clone BRAMY2004363, highly similar to Leucine-rich repeat protein SHOC-2. ACCESSION AK090820 VERSION AK090820.1 KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence). SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2966) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Helix Research Institute, Genomics Laboratory; 1532-3 Yana, Kisarazu, Chiba 292-0812, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R., Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H., Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T., Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y., Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M., Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H., Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T., Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H., Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M., Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S., Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K., Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K., Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y., Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S., Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O., Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F., Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M., Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A., Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M., Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H., Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S., Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y., Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H., Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y., Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N., Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T., Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S. TITLE Complete sequencing and characterization of 21,243 full-length human cDNAs JOURNAL Nat. Genet. 36, 40-45 (2004) REFERENCE 3 AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S., Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2002) COMMENT NEDO human cDNA sequencing project supported by Ministry of Economy, Trade and Industry of Japan; cDNA full insert sequencing: Research Association for Biotechnology (RAB); cDNA library construction: Helix Research Institute (HRI) (supported by Japan Key Technology Center etc.); 5'- & 3'-end one pass sequencing: RAB, HRI, and Biotechnology Center, National Institute of Technology and Evaluation; clone selection for full insert sequencing: HRI and RAB; annotation: HRI and RAB. FEATURES Location/Qualifiers source 1..2966 /clone="BRAMY2004363" /clone_lib="BRAMY2" /db_xref="H-InvDB:HIT000015687" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 25..1119 /codon_start=1 /note="highly similar to Leucine-rich repeat protein SHOC-2" /protein_id="BAG52235.1" /translation="MLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSK LSMLSIRENKIKQLPAEIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNIS TLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRA KVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL LKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLT NLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCP LSHLPPQIVAGGPSFIIQFLKMQGPYRAMV" BASE COUNT 889 a 507 c 533 g 1037 t ORIGIN 1 cttgataact tgaagaagct gcggatgctt gatttacggc ataataaact gagagaaatt 61 ccttcagtgg tgtataggct ggattctctc accactcttt accttcgctt taatcgtata 121 actactgtgg aaaaggacat caaaaacttg tcaaaactca gcatgcttag cattcgagag 181 aacaaaatta aacaactacc tgctgaaatt ggaaacctgt ccagtttaag tcgtcttggt 241 ctgagatata acagactgtc agcaataccc agatcattag caaaatgcag tgcacttgaa 301 gaattaaatt tagagaacaa taacatttct actttaccag agagtctttt atcaagtctt 361 gtgaaactga atagtttgac cttagctaga aattgcttcc agttgtatcc agtgggtggt 421 ccatctcagt tttctaccat ctattccctc aacatggaac acaatcgaat caacaaaatt 481 ccatttggaa ttttctccag agcaaaagta ttaagtaagc tgaatatgaa ggacaatcag 541 ttaacatcac ttcccttgga ttttggaact tggaccagta tggtagaatt gaatttagcc 601 actaatcagc tcacaaagat ccctgaggat gtgtctggtc tcgtttctct tgaggttctt 661 atcttatcaa acaatcttct aaagaagctt ccccatggtc ttggaaacct taggaagtta 721 agagagttgg atctagaaga gaacaaattg gaatccttgc caaatgaaat tgcatatctt 781 aaggatttac agaaattagt cttgacaaac aaccagttga ccactcttcc cagaggcatt 841 ggtcacctta ctaatctcac acatctgggc cttggagaga acctacttac tcaccttcct 901 gaagaaattg gtacactgga gaacctagaa gaactgtatt tgaatgacaa ccccaacctg 961 catagccttc cctttgagct ggcactctgc agcaagcttt caatcatgag tattgagaac 1021 tgtccactca gtcaccttcc acctcagatt gttgctgggg ggccttcttt catcattcag 1081 ttcttaaaga tgcagggtcc atatcgtgcc atggtctgat ataaatctgc tggtcccaca 1141 tactgttcaa aaatagactg ccattaatgt ttcttatcta tatctgtatc tatttatgta 1201 gatattggta tatggcagat ttataaaaat tgcattatgt gtttctgcta atagaggaat 1261 catagccatt tagaattttt tttaaattct gtacaaaagg cttatataag ttttctttgc 1321 tgaatttgat ggatgttttt ctgttgtgta atctgatatg ccagtttgct taaaacattt 1381 gccaacacat tatgaagtta ttaaatttaa gggacagagg tagtatagtt agatatactt 1441 tctcttagga aaaataatgg gcaaaaattt ttgttgcaac ttttcatata tattttcccc 1501 ttaccaattg ttttatcctt atagtattgt aggccctgaa agtagaattt ttctttaact 1561 tatttgagat ttgagattta aattttatgt attgtttaca gtcagagtaa atcactggat 1621 ttcttttgtt tgttttgatt tgctctgttt tattcagtca aatctagagt ttgaatcctc 1681 tgctaaagaa tttgcatcca ctggtgtaaa cagtgaaagg tatttgcttg ttgaaaaaaa 1741 aactggcaaa gtgaaaagat acagtcaaaa atctagaatt tctttaattt tgcttctctg 1801 acgagttgtg aagcaaaata cctgaagtga gtctttgggt aggggaaggg tattgagacc 1861 ttttctagta tgaatatttt ttaagtttgg gggaagagaa acttgcagtg aaaaggagtt 1921 ttttcattcc tgaaagttgc agatccacaa aactaacagg ataattgggc aaataaatta 1981 catataaaca cacacaatct atatatgtat atacaatgct atatagatat gtatttatta 2041 tatcataaac tacagtaggt aactttaagg atttcttcct atccttgtac aatgacatga 2101 acgtctttct ttgaaaactg caatgtatgt atgtttcaag gttatttaac agtgtactat 2161 ggttttatat cttgacttgc cttgtacatc tttcaattct ggaatatctg tgtctaagca 2221 caatatcttc acactgtgct gtattgctgc tgaactaaat gcacttttcc ccacatatgg 2281 ggcactggct tcaaacaatt cagttcagta tcattacttt taatctcatc tttcctttct 2341 tggtagttgt taatacagtt atggaaaaga ggcacattgc atagaagcca ttggggagtt 2401 cagtggaagt tctgtaagat gtgcatgtac tatttgatgc gttttctttg cttcactgct 2461 tttaatactt agcagtattg ttggtctaag tcaatttgat tattgaggag tctcagagca 2521 aggtgcgttc tagatgtcat cctaaaaaac acttcatata taattaatca ctattttgta 2581 taattacata ttgctgcttg tgtgtttttt ttttttttcc gtttagttgg gcgttgtgtt 2641 ttacacaaaa ccatttttga attaaggcta tgatattaag atagaaattt ggactgttgt 2701 tctgcttttc ctggcactca aattcatgac tagttttgag gtcaaaccta tgctcgtaat 2761 gagagatttt ataaggatca actaagaaat ggaaggcagg tgaagatata aaaccctaga 2821 atgcttaaat gtgctgtaaa actattgtag atgtcactgg attttaccaa gtaatatcct 2881 ttcttttttt tttcccccca tctgctgtgg cttttcagtt aaaattttgt ttataaaagg 2941 aatttgttta ttacagctct acctag //