LOCUS AK090671 2267 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ33352 fis, clone BRACE2005087, weakly similar
to PRE-MRNA SPLICING HELICASE BRR2 (EC 3.6.1.-).
ACCESSION AK090671
VERSION AK090671.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2267)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tanigami,A., Fujiwara,T., Shibahara,T., Goto,Y., Hirao,M.,
Shimizu,F., Wakebe,H., Ono,T., Hishigaki,H., Watanabe,T.,
Ozaki,K., Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Murakawa,K.,
Kanehori,K., Takahashi-Fujii,A., Oshima,A., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2267
/clone="BRACE2005087"
/clone_lib="BRACE2"
/db_xref="H-InvDB:HIT000015538"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="cerebellum"
CDS 110..1987
/codon_start=1
/protein_id="BAC03499.1"
/translation="MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLV
GKLEGTRMGDKAQRTKPQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIY
KPKTKETRETYEVLLSFIQAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLL
LGQTDDTRYHVLVNLGKKITDYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYG
EVREEASDDDMEGDEAVVRCTLSANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFY
DDAIVSQKKADEVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLL
ASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLE
TMDLDQGGEALAPRQVLDLEDLVFTQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPAL
KPKPFGSEEQLLPVEKLPKYAQAGFEGFKTLNRIQSKLYRAALETDENLLLCAPTGAG
KTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGKRLAKSNSLI
SIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDS
D"
BASE COUNT 585 a 500 c 669 g 513 t
ORIGIN
1 agtgcgtctt tcctgcgtcg ttccggcgcg gcgggagcag agatctgcgg ccgtttgcag
61 cttgcggtag ggaggcgtgg tggtctgaag cctccgagca gccgcggcca tggcggatgt
121 aaccgcccgt agtctgcaat acgagtacaa ggcgaactcg aatcttgtgc tccaagctga
181 ccgttctctc attgaccgga cccgccggga tgaacccaca ggagaggtgc tgtcccttgt
241 tgggaagctg gagggcaccc gtatgggaga caaggctcaa cggaccaaac cgcagatgca
301 ggaggaaaga agagccaagc gaagaaagcg tgatgaggac cggcatgaca tcaacaagat
361 gaagggttat actctgctgt cggagggcat tgatgagatg gtgggcatca tctacaagcc
421 caaaactaaa gagactcggg agacctatga ggtgctactc agcttcatcc aggctgctct
481 tggggaccag ccacgtgata tcctttgtgg ggcagctgat gaagttctag ctgttctaaa
541 gaatgaaaag ctgcgggaca aggaaaggcg aaaggagatt gacctgctgc tgggtcaaac
601 agatgatacc agataccatg tgctagtgaa cctgggcaaa aagatcacag actatggtgg
661 agataaggaa atccaaaata tggatgacaa cattgatgag acatacggtg tgaatgtgca
721 gtttgagtct gatgaggagg aaggtgatga agacgtatac ggggaggttc gagaagaggc
781 atctgatgat gacatggaag gggacgaggc tgtcgtgcgc tgcaccctct cggctaatct
841 cgtagcctca ggtgaactga tgagttccaa gaagaaggat ttgcaccctc gggatattga
901 tgcattttgg ctgcagcggc agctcagtcg tttctatgat gatgccatcg tgtcgcagaa
961 gaaggcagat gaagtattgg agattttgaa gacggccagt gatgatcggg aatgtgaaaa
1021 tcagctggtt ctgctgcttg gtttcaacac ctttgatttc attaaagtgt tgcggcagca
1081 caggatgatg attttatact gtaccttgct ggccagtgca caaagtgaag ctgaaaagga
1141 aaggattatg ggaaagatgg aagctgaccc agagctatcc aagttcctct accagcttca
1201 tgaaaccgag aaggaggatc tgatccgaga ggaaaggtcc cggagagagc gagtgcgtca
1261 gtctcgaatg gacacagatc tggaaaccat ggatctcgac cagggtggag aggcactggc
1321 tccacggcag gttctggact tggaggacct ggtttttacc caagggagcc actttatggc
1381 caataaacgc tgtcagcttc ctgatggatc cttccgtcgc cagcgtaagg gctatgaaga
1441 ggtgcatgtg cctgctctga agcccaagcc ctttggctca gaagaacaac tgcttccagt
1501 ggaaaagctg ccaaagtatg cccaggctgg gtttgagggc ttcaaaacac tgaatcggat
1561 ccagagtaag ctctaccgtg ctgcccttga gacggatgag aatctgctgc tgtgtgctcc
1621 tactggtgct gggaagacca acgtggccct gatgtgcatg ctccgagaga ttgggaaaca
1681 cataaacatg gacggcacca tcaatgtgga tgacttcaag attatctaca ttgcccccat
1741 gcgctccttg gtgcaggaga tggtgggcag ctttggaaag cgcctggcca agtccaatag
1801 cctcatctcc atcaagaggc tgaccttgca gcagaaggcc aaggtgaagt tggactttgt
1861 ggccccagcc actggtgccc acaactacac tctgtacttc atgagtgacg cttacatggg
1921 atgtgaccag gagtacaaat tcagcgtgga tgtgaaagaa gctgagacag acagtgattc
1981 agattgagtc ctgaggcatt tacttttggg taaaggagag ttgagcctga attaggaatg
2041 tgtacattgt aggaatcctg gttgtgggga ccaggtctgt gggcctcagg tctggccagc
2101 cagggctggt gctgtccccg cctacctcca cttcctttcc cttgctcact ctggatccag
2161 tgacagcagg tgtcatgggt caagcataaa tcatatatag cattttcagg catgttcctg
2221 gtagttcttt tgagtctgac attctaataa aataatttgt agaaacc
//