LOCUS AK090646 2151 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ33327 fis, clone BNGH42009025, weakly similar
to Homo sapiens t-complex 11(TCP11), mRNA.
ACCESSION AK090646
VERSION AK090646.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2151)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2151
/cell_line="H4"
/cell_type="neuroglioma"
/clone="BNGH42009025"
/clone_lib="BNGH42"
/db_xref="H-InvDB:HIT000015513"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 384..1913
/codon_start=1
/note="weakly similar to Homo sapiens t-complex
11(TCP11), mRNA"
/protein_id="BAG52206.1"
/translation="MSENLDKSNVNEAGKSKSNDSEEGLEDAVEGADEALQKAIKSDS
SSPQRVQRPHSSPPRFVTVEELLETARGVTNTALAHEIVVNGDFQIKPVELPENSLKK
RVKEIVHKAFWDCLSVQLSEDPPAYDHAIKLVGEIKETLLSFLLPGHTRLRNQITEVL
DLDLIKQEAENGALDISKLAEFIIGMMGTLCAPARDEEVKKLKDIKEIVPLFREIFSV
LDLMKVDMANFAISSIRPHLMQQSVEYERKKFQEILERQPNSLDFVTQWLEEASEDLM
TQKYKHALPVGGMAAGSGDMPRLSPVAVQNYAYLKLLKWDHLQRPFPETVLMDQSRFH
ELQLQLEQLTILGAVLLVTFSMAAPGISSQADFAEKLKMIVKILLTDMHLPSFHLKDV
LTTIGEKVCLEVSSCLSLCGSSPFTTDKETVLKGQIQAVASPDDPIRRIMESRILTFL
ETYLASGHQKPLPTVPGGLSPVQRELEEVAIKFARLVNYNKMVFCPYYDAILSKILVR
S"
BASE COUNT 569 a 542 c 552 g 488 t
ORIGIN
1 ctgaggaaac acggcgccgc ccagctgcga gtcaccgctt actgaacccc ttcggcaagc
61 aggggaaaga ccctcccgcc tttccgtacg aagacatggc gctgccctat attgggctgg
121 cgcctcccgg ccaagagcag tctcctcctt cctgatgctg agaagcggcc gctctgaccg
181 ctgcccaccc gagtcgggct gggaggaccg cccgccgcgt ggcgagggat gcggcctcgg
241 aggggcagag gctgaaccgc ccctgcctgc cgcgcatccc tccggcttcc gccgcggcgc
301 cagcccgcgc ctgattcgcg gcgggagcgg caggagggag aacgccgact ccgtggcagg
361 aaagtgaata aacttaattg agaatgtctg aaaaccttga caagtccaat gtaaatgaag
421 caggaaaatc aaaatccaat gattctgagg aaggcctcga agatgctgtg gaaggtgctg
481 atgaagcctt acaaaaagca ataaagtcag actcctccag cccccaaaga gtgcagagac
541 ctcactctag tcctcctcgc tttgtgacag tagaagaact tctagagaca gcgagaggtg
601 tcaccaacac ggctctagcc catgaaattg tagtaaatgg agactttcag attaaaccag
661 ttgaattacc agaaaacagc ttgaagaaga gagtaaagga gattgtacat aaagcgtttt
721 gggattgctt gagtgtgcag ctaagtgaag atcccccagc atatgaccat gctatcaaac
781 ttgtaggaga aatcaaagag actctcttat ctttcttgct gcctggtcat actagactga
841 gaaaccagat aacagaagtc ttggatctgg atctgataaa gcaggaagca gagaatgggg
901 cgctagacat ttccaagctg gcagaattca ttattggcat gatggggaca ctgtgtgcac
961 ctgctcgaga tgaggaagtt aagaaactaa aggacattaa ggaaatagtg ccccttttca
1021 gagaaatttt ttctgtgttg gacctaatga aagtggacat ggccaacttt gctatcagta
1081 gcatcaggcc tcatctcatg cagcagtcag ttgaatacga aaggaagaag tttcaagaga
1141 ttttggagag gcaaccaaat tccctggact ttgtcaccca gtggctggaa gaagcctcag
1201 aggaccttat gactcagaag tataaacacg ccctgccagt ggggggaatg gctgctggct
1261 ctggggacat gcccaggctg agccctgttg ctgtccagaa ttacgcttac ctgaagcttc
1321 tgaagtggga ccacctccag aggccgttcc ccgaaacagt tttaatggac cagtctcgct
1381 tccacgagct ccagttgcag ctggaacaac tgaccatcct gggggctgtg ttgctggtca
1441 ccttcagcat ggcagcgcca ggaatttcca gccaggccga ctttgctgag aaactcaaga
1501 tgattgtgaa gattttgcta acagatatgc acctgccctc cttccatctg aaggacgtcc
1561 tcactaccat cggggagaag gtgtgcctgg aggtgagcag ctgcctctcc ctgtgtgggt
1621 cctctccctt caccacggac aaggagaccg tgctcaaggg ccagatccag gccgtggcca
1681 gtcccgatga ccccattcgc aggatcatgg aatctcgaat cctgaccttc ttagaaacct
1741 accttgcctc gggtcatcag aagccattgc ccacagtccc tgggggactc agtccagttc
1801 agagagagct ggaggaagtt gctattaaat ttgctcgcct ggtcaactat aacaagatgg
1861 tcttctgtcc ctactacgat gcaatcctga gtaagatcct cgtccgatcc taacgtgtat
1921 gcaccctaca gcagcagtat tactcactag ccacagaata cctgttctgt actctaatgt
1981 tgcattggaa aatggctata tagtacatgt ctatttaaca gcaccgattc caaagggaag
2041 aatattgtgt atcactgttg aaaagacttg ttgagaaatc cactgaattc tattttgaga
2101 gattgtattt atgagtgcaa gtttacaaat caaagaagca ttttgttctc g
//