LOCUS AK075541 3593 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA PSEC0241 fis, clone NT2RP3000234, moderately
similar to Homo sapiens cerebral cell adhesion molecule mRNA.
ACCESSION AK075541
VERSION AK075541.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3593)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nishikawa,T., Suzuki,Y., Kawai-Hio,Y., Hayashi,K.,
Ishii,S., Saito,K., Yamamoto,J., Wakamatsu,A., Nagai,T.,
Nakamura,Y., Nagahari,K., Sugano,S. and Isogai,T.
TITLE HRI human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT HRI human cDNA sequencing project; cDNA 5'- & 3'-end one pass
sequencing, clone selection and full insert sequencing: Helix
Research Institute (supported by Japan Key Technology Center
etc.); cDNA library construction: Institute of Medical Science,
University of Tokyo, Laboratory of Genome Structure, Human Genome
Center.
FEATURES Location/Qualifiers
source 1..3593
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP3000234"
/clone_lib="NT2RP3"
/db_xref="H-InvDB:HIT000082574"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction"
/organism="Homo sapiens"
CDS 13..1881
/codon_start=1
/protein_id="BAC11684.1"
/translation="MAAAPRAGRRRGQPLLALLLLLLAPLPPGAPPGADAYFPEERWS
PESPLQAPRVLIALLARNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLR
EWLVAVKSLYHSVEWRPAEEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWAD
YILFVDADNLILNPDTLSLLIAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYI
PIRKRDRRGCFAVPMVHSTFLIDLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQA
EVQMYVCNKEEYGFLPVPLRAHSTLQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKT
PDKMGFDEVFMINLRRRQDRRERMLRALQAQEIECRLVEAVDGKAMNTSQVEALGIQM
LPGYRDPYHGRPLTKGELGCFLSHYNIWKEVVDRGLQKSLVFEDDLRFEIFFKRRLMN
LMRDVEREGLDWDLIYVGRKRMQVEHPEKAVPRVRNLVEADYSYWTLAYVISLQGARK
LLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAHFSLRNLHAFSVEPLLIYPTHYTGDDG
YVSDTETSVVWNNEHVKTDWDRAKSQKMREQQALSREAKNSDVLQSPLDSAARDEL"
BASE COUNT 709 a 1035 c 1048 g 801 t
ORIGIN
1 acgcgtggcg cgatggcggc ggccccacgc gcgggccggc ggcgcgggca gccgctcctg
61 gcgctgctgc ttctgctgct ggcgccactg ccgccggggg ccccgccggg cgccgacgcc
121 tactttcccg aggagcgctg gagcccggag tcgcccctgc aggcgccgcg cgtgctcatc
181 gcgctgttgg cgcgaaacgc ggcccacgcg ttgcccacca cgctgggcgc actcgagcgg
241 ctgcggcacc cgcgggagcg cacggcgcta tgggtggcta cggaccacaa catggataac
301 acgtcaactg tgctgcggga gtggctggtg gccgtgaaga gtttgtacca ttccgtggag
361 tggcggccag cagaggagcc caggtcctac ccggacgagg aaggcccgaa acactggtct
421 gactcacgct acgagcatgt catgaagttg cgccaggcag ccctgaaatc agctcgagac
481 atgtgggctg attacatcct gtttgtagat gcggacaacc tgatcctcaa ccctgacaca
541 ctgagcctgc tcatcgctga gaacaagacg gtggtcgccc ccatgctgga ttcccgggct
601 gcgtactcca acttctggtg tggaatgact tcccagggct actacaagcg cacacctgcc
661 tacatcccta tccgcaagcg agaccgccgg ggctgctttg cagttcccat ggtgcactcg
721 accttcctga tcgacctgcg gaaggcggcg tccaggaacc tggccttcta cccacctcac
781 cctgactaca cctggtcctt tgacgacatc atcgtctttg ccttctcctg caagcaggca
841 gaggttcaga tgtatgtgtg caacaaggag gagtacggat tcttgccagt gccattgcgc
901 gcccacagca ccctccagga tgaggccgag agcttcatgc atgtgcagct ggaggtcatg
961 gtgaagcacc cgcccgcaga gccctcccgc ttcatctcgg ctcccaccaa gacaccggac
1021 aagatgggct tcgacgaggt cttcatgatc aacctgaggc ggcggcagga ccggcgggag
1081 cgcatgctgc gggcgctgca ggcacaggag atcgagtgcc ggctggtgga ggccgtggac
1141 ggcaaagcca tgaacaccag ccaggtggag gcgctgggga tccagatgct gcctggctac
1201 cgggacccct accacggccg gcccctcacc aagggtgagc tgggctgctt cctgagccac
1261 tacaacatct ggaaggaggt ggtggaccgg gggctgcaga aatcgcttgt gtttgaggat
1321 gacctgcgtt ttgagatctt cttcaagaga cgtctgatga acctcatgcg ggatgtggag
1381 cgggagggcc tggactggga cctcatctat gtgggccgga agcggatgca ggtggagcac
1441 cccgagaagg ctgtgcctcg cgtgaggaac ctggtggagg ccgactattc ctactggacc
1501 ctggcctacg tgatctccct gcaaggcgcc cgcaaactgc tggctgctga gccgctctcc
1561 aagatgctgc ctgtggacga gttcctgccc gtcatgttcg acaaacaccc agtgtccgag
1621 tacaaggccc acttctccct ccgcaacctg catgccttct ctgtggagcc gctgctcatc
1681 taccccacac actacacagg agacgatggc tatgtgagtg acaccgagac ctcagtcgta
1741 tggaacaatg agcacgtcaa gaccgactgg gaccgcgcca agtcccagaa gatgcgggag
1801 cagcaggcac tgagccgtga ggccaagaac tcggacgtgc tccagtcccc actggacagt
1861 gctgcccggg atgaactctg aggggtagca gccagaaagc caaagcagcc atcggtggcc
1921 caggctccac gtgcttactg aggacatcag ggccacctct ggaccccttg gcaggccaca
1981 gagggctctc gtgtggggtg gtgtccagcc agctcttgct aagcaatcac gtgcacacag
2041 gcagcattaa tggagtgcct actgcatgcc agcaacaggg cttggccctg gggaattggg
2101 aggaaccaag ccctcttcat ctgttcatgt gcccagcatt tattaagcac ctgctgtatg
2161 caaggttccc atgttacggc agtgaatgag gcataattgt tccctccatc agcgattgat
2221 tcagtcatca agcagttact gatcagatta agaatcaggc actagtgata cacattcatt
2281 tttaaaattc attcaaggat ttattgagtg cctactgtgt gttgggtgcc attccaggct
2341 ctgggatttt tttttttttt tttttaagag tagagtctgt ctctgtcacc caggctggag
2401 tgcagtggtg tgacggctca ctgcagcctg cgcctcccag cgtccagcaa ttcttgtttc
2461 tcggcctccc aagtagctgg gactataggt gcgtgccatc acatctggct agtttttgta
2521 tttttagtag agacggggtt tcaccatgtt ggccagactg gtctcgaact cctgacctca
2581 agtgatctgc ccgccttggc cacccaaagt gctagggtta caggcatgag ccactgtgcc
2641 cagcccaggc tctgggaata ttgagataaa taagatgctt ctatccattt attcaagcac
2701 atattggtca cctactgtgt gcctggcact catgtcacaa agataagttc ctgattcggt
2761 acacttactg agcacctgct gtgtgcaggg agctgagcta tgggatggga atgggagtaa
2821 acaaggtact tttcactttt ttcttttttt cctcactgct agacggtgtg ggaacttctc
2881 actcattggc ttctttccca cacacctgaa gagcactgac tgtgtgccgg gcactagtga
2941 tacaaaagag tgtgacagtt gttcagtctg cattttcgat catgggctac atgccgagtg
3001 ctggggcaca gagatgaaca agatcggttc cttcacttct tcatgccaca agtgtttatt
3061 gagcacctgt gtgccaggcc tcacagactc ccagttgggt tgaagaatgg ttgactgagt
3121 ttgattcttc ctgtaccctc ggtcgtctga gctgtgtgcg gacaacatcc ccccaccacc
3181 caagagggag ggtagctctt ccgccaccag gggcaagcac aggtcctggt ggccccacgc
3241 cacatgttag cccccctgga gggggcgcca gttggagacg ggggctgggt gtccctggcc
3301 cactcccagt cccctgtgct ttacctcctt gcccttgtgt ctcaggtgtg gtccctgcct
3361 gcttgatgaa gttgctctgt tcaagccttt ggtgggatca tgtgtttggg ggcttttagg
3421 ggacccagct gcactggggc actgcccgtg gcctgggtag gacatttccc agcaagggct
3481 ggaggagttg ccgtgccttc agcctgaatc gaatgtcaga accagccagc ggtgcttcac
3541 cctcttgggg ataacttgct tagtttttta ataaatgttc ctggttggtt ttc
//