LOCUS AK075480 2904 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA PSEC0174 fis, clone NT2RP2002760, highly similar
to SYNAPTIC VESICLE PROTEIN 2.
ACCESSION AK075480
VERSION AK075480.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2904)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nishikawa,T., Suzuki,Y., Kawai-Hio,Y., Hayashi,K.,
Ishii,S., Saito,K., Yamamoto,J., Wakamatsu,A., Nagai,T.,
Nakamura,Y., Nagahari,K., Sugano,S. and Isogai,T.
TITLE HRI human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT HRI human cDNA sequencing project; cDNA 5'- & 3'-end one pass
sequencing, clone selection and full insert sequencing: Helix
Research Institute (supported by Japan Key Technology Center
etc.); cDNA library construction: Institute of Medical Science,
University of Tokyo, Laboratory of Genome Structure, Human Genome
Center.
FEATURES Location/Qualifiers
source 1..2904
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2002760"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000082513"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction"
/organism="Homo sapiens"
CDS 452..2500
/codon_start=1
/protein_id="BAC11645.1"
/translation="MEEGFRDRAAFIRGAKDIAKEVKKHAAKKVVKGLDRVQDEYSRR
SYSRFEEEDDDDDFPAPSDGYYRGEGTQDEEEGGASSDATEGHDEDDEIYEGEYQGIP
RAESGGKGERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKEREELAQQYEAILRECG
HGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVG
AFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIV
FSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWR
VFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVF
SVTHIKTIHQEGELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMM
MGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRG
GQYFNDKFIGLRLKSASFEDSLFEECYFEDVTSSNAFFRNCTFINTVFYNTDLFEYKF
VNSRLINSTFLHNKEDCPLDVTGTGEGAYMVYFVSFLGTLAVLPRNIVSALLMDKIGR
LRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKR
"
BASE COUNT 597 a 741 c 869 g 697 t
ORIGIN
1 tttgccgctt ccctggtgcc gggagcagtc gccgctgccg cctccgcccg cggccgggac
61 ccccgtcctc gcccgggact ccttacccgg ggaacctaga ccaggtctcc agaggcttgt
121 ggaagagaag caggcgaccc ttcctgagtt atcctggctt agcctcccaa tctggctccc
181 cttccccttc ccattcccct gctccccctg tcccttcccc atccacccaa ctgaactggg
241 tataggtcaa agctcctctc tttccttttc cttcctaggc actcattggc taggacctgt
301 ttgctctttt ttttgtgccc agagatactg gaacacgctt catctaagta actgtgggga
361 ggggtctttt tgactctaca agtccttgag caaaaagctg aaaaagaagc aggaggtgga
421 gaagacccag tgaagtgccc caagccccat catggaagag ggcttccgag accgggcagc
481 tttcatccgt ggggccaaag acattgctaa ggaagtcaaa aagcatgcgg ccaagaaggt
541 ggtgaagggc ctggacagag tccaggacga atattcccga agatcgtact cccgctttga
601 ggaggaggat gatgatgatg acttccctgc tcccagtgat ggttattacc gaggagaagg
661 gacccaggat gaggaggaag gtggtgcatc cagtgatgct actgagggcc atgacgagga
721 tgatgagatc tatgaagggg aatatcaggg cattccccgg gcagagtctg ggggcaaagg
781 cgagcggatg gcagatgggg cgcccctggc tggagtaagg gggggcttga gtgatgggga
841 gggtccccct gggggccggg gggaggcaca acgacggaaa gaacgagaag aactggccca
901 acagtatgaa gccatcctac gggagtgtgg ccacggccgc ttccagtgga cactgtattt
961 tgtgcttggt ctggcgctga tggctgacgg tgtggaggtc tttgtggtgg gcttcgtgct
1021 gcccagcgct gagaaagaca tgtgcctgtc cgactccaac aaaggcatgc taggcctcat
1081 cgtctacctg ggcatgatgg tgggagcctt cctctgggga ggtctggctg accggctggg
1141 tcggaggcag tgtctgctca tctcgctctc agtcaacagc gtcttcgcct tcttctcatc
1201 ttttgtccag ggttacggca ctttcctctt ctgccgccta ctttctgggg ttgggattgg
1261 agggtccatc cccattgtct tctcctattt ctccgagttt ctggcccagg agaaacgagg
1321 ggagcatttg agctggctct gcatgttttg gatgattggt ggcgtgtacg cagctgctat
1381 ggcctgggcc atcatccccc actatgggtg gagttttcag atgggttctg cctaccagtt
1441 ccacagctgg agggtcttcg tcctcgtctg cgcctttcct tctgtgtttg ccattggggc
1501 tctgaccacg cagcctgaga gcccccgttt cttcctagag aatggaaagc atgatgaggc
1561 ctggatggtg ctgaagcagg tccatgatac caacatgcga gccaaaggac atcctgagcg
1621 agtgttctca gtaacccaca ttaagacgat tcatcaggag ggtgaattga ttgagatcca
1681 gtcggacaca gggacctggt accagcgctg gggggtccgg gccttgagcc taggggggca
1741 ggtttggggg aattttctct cctgttttgg tcccgaatat cggcgcatca ctctgatgat
1801 gatgggtgtg tggttcacca tgtcattcag ctactatggc ctgaccgtct ggtttcctga
1861 catgatccgc catctccagg cagtggacta cgcatcccgc accaaagtgt tccccgggga
1921 gcgcgtagag catgtaactt ttaacttcac gttggagaat cagatccacc gaggcgggca
1981 gtacttcaat gacaagttca ttgggctgcg gctcaagtca gcgtcctttg aggattccct
2041 gtttgaagag tgttattttg aggatgtcac atccagcaac gcgtttttcc gcaactgcac
2101 attcatcaac actgtgttct ataacactga cctgttcgag tacaagtttg tgaacagccg
2161 tctgataaac agtacattcc tgcacaacaa ggaggactgc ccgctagacg tgacagggac
2221 gggcgaaggt gcctacatgg tatactttgt gagcttcctg gggacactgg cagtgcttcc
2281 taggaatatc gtgtctgccc tgctcatgga caagatcggc aggctcagaa tgcttgctgg
2341 ctccagcgtg atgtcctgtg tctcctgctt cttcctgtct tttgggaaca gtgagtcggc
2401 catgatcgct ctgctctgcc tttttggcgg ggtcagcatt gcatcctgga atgcgctgga
2461 cgtgttgact gttgaactct acccctcaga caagaggtag ttggaatgtg ttggaggcag
2521 ggcagtggat tcaggggagg ggtggggtga ggaaggaggg ctgaatggga agagcatcct
2581 taggggtgag aggatataca tttccatttt ctcctctaaa atctggtagc tttggccggg
2641 cacggtgact catgcctgta atcccagtgc tttgggaggc cgaggcaggc agatcacctg
2701 aggtcaggag tttgagacca gcctggccaa catggtgaaa ccctgtctgt actaaaaata
2761 caaaaagtta gctgggtgcc tgtaatcgca gctactcagg aggctaaggc aggagaattg
2821 cttgaacccg ggaggtggag ctttcagtga gccgagatcg caccactgca ctccagcctg
2881 ggcaacagag caagactccg tctc
//