LOCUS AK075348 1683 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA PSEC0029 fis, clone NT2RP1000544, highly similar
to Retinal short-chain dehydrogenase/reductase 2.
ACCESSION AK075348
VERSION AK075348.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1683)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nishikawa,T., Suzuki,Y., Kawai-Hio,Y., Hayashi,K.,
Ishii,S., Saito,K., Yamamoto,J., Wakamatsu,A., Nagai,T.,
Nakamura,Y., Nagahari,K., Sugano,S. and Isogai,T.
TITLE HRI human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT HRI human cDNA sequencing project; cDNA 5'- & 3'-end one pass
sequencing, clone selection and full insert sequencing: Helix
Research Institute (supported by Japan Key Technology Center
etc.); cDNA library construction: Institute of Medical Science,
University of Tokyo, Laboratory of Genome Structure, Human Genome
Center.
FEATURES Location/Qualifiers
source 1..1683
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP1000544"
/clone_lib="NT2RP1"
/db_xref="H-InvDB:HIT000082383"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pUC19FL3"
/note="mRNA from NT2 neuronal precursor cells after
48-hours retinoic acid (RA) induction"
/organism="Homo sapiens"
CDS 118..1020
/codon_start=1
/protein_id="BAC11560.1"
/translation="MKFLLDILLLLPLLIVCSLESFVKLFIPKRRKSVTGETVLITGA
GHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYS
SAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMT
KNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP
NFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLTTLERILPER
FLAVLKRKISVKFDAVIGYKMKAQ"
BASE COUNT 517 a 320 c 329 g 517 t
ORIGIN
1 agttcctcct tgctctcgcc cctactcttt ctggtgttag atcgagcaac cctctaaaag
61 cagtttagag tggtaaaaaa aaaaaaaaca caccaaacgc tcgcagccac aaaagggatg
121 aaatttcttc tggacatcct cctgcttctc ccgttactga tcgtctgctc cctagagtcc
181 ttcgtgaagc tttttattcc taagaggaga aaatcagtca ccggcgaaac cgtgctgatt
241 acaggagctg ggcatggaat tgggagactg actgcctatg aatttgctaa acttaaaagc
301 aagctggttc tctgggatat aaataagcat ggactggagg aaacagctgc caaatgcaag
361 ggactgggtg ccaaggttca tacctttgtg gtagactgca gcaaccgaga agatatttac
421 agctctgcaa agaaggtgaa ggcagaaatt ggagatgtta gtattttagt aaataatgct
481 ggtgtagtct atacatcaga tttgtttgct acacaagatc ctcagattga aaagactttt
541 gaagttaatg tacttgcaca tttctggact acaaaggcat ttcttcctgc aatgacgaag
601 aataaccatg gccatattgt cactgtggct tcggcagctg gacatgtctc ggtccccttc
661 ttactggctt actgttcaag caagtttgct gctgttggat ttcataaaac tttgacagat
721 gaactggctg ccttacaaat aactggagtc aaaacaacat gtctgtgtcc taatttcgta
781 aacactggct tcatcaaaaa tccaagtaca agtttgggac ccactctgga acctgaggaa
841 gtggtaaaca ggctgatgca tgggattctg actgagcaga agatgatttt tattccatct
901 tctatagctt ttttaacaac attggaaagg atccttcctg agcgtttcct ggcagtttta
961 aaacgaaaaa tcagtgttaa gtttgatgca gttattggat ataaaatgaa agcgcaataa
1021 gcacctagtt ttctgaaaac tgatttacca ggtttaggtt gatgtcatct aatagtgcca
1081 gaattttaat gtttgaactt ctgttttttc taattatccc catttcttca atatcatttt
1141 tgaggctttg gcagtcttca tttactacca cttgttcttt agccaaaagc tgattacata
1201 tgatataaac agagaaatac ctttagaggt gactttaagg aaaatgaaga aaaagaacca
1261 aaatgacttt attaaaataa tttccaagat tatttgtggc tcacctgaag gctttgcaaa
1321 atttgtacca taaccgttta tttaacatat atttttattt ttgattgcac ttaaattttg
1381 tataatttgt gtttcttttt ctgttctaca taaaatcaga aacttcaagc tctctaaata
1441 aaatgaagga ctatatctag tggtatttca caatgaatat catgaactct caatgggtag
1501 gtttcatcct acccattgcc actctgtttc ctgagagata cctcacattc caatgccaaa
1561 catttctgca cagggaagct agaggtggat acacgtgttg caagtataaa agcatcactg
1621 ggatttaagg agaattgaga gaatgtaccc acaaatggca gcaataataa atggatcaca
1681 ctt
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