LOCUS AK075309 3515 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ90828 fis, clone Y79AA1001727, highly similar
to Junctional adhesion molecule 3 precursor.
ACCESSION AK075309
VERSION AK075309.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3515)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..3515
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="Y79AA1001727"
/clone_lib="Y79AA1"
/db_xref="H-InvDB:HIT000082344"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 14..946
/codon_start=1
/protein_id="BAC11538.1"
/translation="MALRRPPRLRLCARLPDFFLLLLFRGCLIGAVNLKSSNRTPVVQ
EFESVELSCIITDSQTSDPRIEWKKIQDEQTTYVFFDNKIQGDLAGRAEILGKTSLKI
WNVTRRDSALYRCEVVARNDRKEIDEIVIELTVQVKPVTPVCRVPKAVPVGKMATLHC
QESEGHPRPHYSWYRNDVPLPTDSRANPRFRNSSFHLNSETGTLVFTAVHKDDSGQYY
CIASNDAGSARCEEQEMEVYDLNIGGIIGGVLVVLAVLALITLGICCAYRRGYFINNK
QDGESYKNPGKPDGVNYIRTDEEGDFRHKSSFVI"
BASE COUNT 916 a 826 c 844 g 929 t
ORIGIN
1 agcaaccctc gacatggcgc tgaggcggcc accgcgactc cggctctgcg ctcggctgcc
61 tgacttcttc ctgctgctgc ttttcagggg ctgcctgata ggggctgtaa atctcaaatc
121 cagcaatcga accccagtgg tacaggaatt tgaaagtgtg gaactgtctt gcatcattac
181 ggattcgcag acaagtgacc ccaggatcga gtggaagaaa attcaagatg aacaaaccac
241 atatgtgttt tttgacaaca aaattcaggg agacttggcg ggtcgtgcag aaatactggg
301 gaagacatcc ctgaagatct ggaatgtgac acggagagac tcagcccttt atcgctgtga
361 ggtcgttgct cgaaatgacc gcaaggaaat tgatgagatt gtgatcgagt taactgtgca
421 agtgaagcca gtgacccctg tctgtagagt gccgaaggct gtaccagtag gcaagatggc
481 aacactgcac tgccaggaga gtgagggcca cccccggcct cactacagct ggtatcgcaa
541 tgatgtacca ctgcccacgg attccagagc caatcccaga tttcgcaatt cttctttcca
601 cttaaactct gaaacaggca ctttggtgtt cactgctgtt cacaaggacg actctgggca
661 gtactactgc attgcttcca atgacgcagg ctcagccagg tgtgaggagc aggagatgga
721 agtctatgac ctgaacattg gcggaattat tgggggggtt ctggttgtcc ttgctgtact
781 ggccctgatc acgttgggca tctgctgtgc atacagacgt ggctacttca tcaacaataa
841 acaggatgga gaaagttaca agaacccagg gaaaccagat ggagttaact acatccgcac
901 tgacgaggag ggcgacttca gacacaagtc atcgtttgtg atctgagacc cgcggtgtgg
961 ctgagagcgc acagagcgca cgtgcacata cctctgctag aaactcctgt caaggcagcg
1021 agagctgatg cactcggaca gagctagaca ctcattcaga agcttttcgt tttggccaaa
1081 gttgaccact actcttctta ctctaacaag ccacatgaat agaagaattt tcctcaagat
1141 ggacccggta aatataacca caaggaagcg aaactgggtg cgttcactga gttgggttcc
1201 taatctgttt ctggcctgat tcccgcatga gtattagggt gatcttaaag agtttgctca
1261 cgtaaacgcc cgtgctgggc cctgtgaagc cagcatgttc accactggtc gttcagcagc
1321 cacgacagca ccatgtgaga tggcgaggtg gctggacagc accagcagcg catcccggcg
1381 ggaacccaga aaaggcttct tacacagcag ccttacttca tcggcccaca gacaccaccg
1441 cagtttcttc ttaaaggctc tgctgatcgg tgttgcagtg tccattgtgg agaagctttt
1501 tggatcagca ttttgtaaaa acaaccaaaa tcaggaaggt aaattggttg ctggaagagg
1561 gatcttgcct gaggaaccct gcttgtccaa cagggtgtca ggatttaagg aaaaccttcg
1621 tcttaggcta agtctgaaat ggtactgaaa tatgcttttc tatgggtctt gtttatttta
1681 taaaatttta catctaaatt tttgctaagg atgtattttg attattgaaa agaaaatttc
1741 tatttaaact gtaaatatat tgtcatacaa tgttaaataa cctatttttt taaaaaagtt
1801 caacttaagg tagaagttcc aagctactag tgttaaattg gaaaatatca ataattaaga
1861 gtattttacc caaggaatcc tctcatggaa gtttactgtg atgttccttt tctcacacaa
1921 gttttagcct ttttcacaag ggaactcata ctgtctacac atcagaccat agttgcttag
1981 gaaaccttta aaaattccag ttaagcaatg ttgaaatcag tttgcatctc ttcaaaagaa
2041 acctctcagg ttagctttga actgcctctt cctgagatga ctaggacagt ctgtacccag
2101 aggccaccca gaagccctca gatgtacata cacagatgcc agtcagctcc tggggttgcg
2161 ccaggcgccc ccgctctagc tcactgttgc ctcgctgtct gccaggaggc cctgccatcc
2221 ttgggccctg gcagtggctg tgtcccagtg agctttactc acgtggccct tgcttcatcc
2281 agcacagctc tcaggtgggc actgcaggga cactggtgtc ttccatgtag cgtcccagct
2341 ttgggctcct gtaacagacc tctttttggt tatggatggc tcacaaaata gggcccccaa
2401 tgctattttt ttttttaagt ttgtttaatt atttgttaag attgtctaag gccaaaggca
2461 attgcgaaat caagtctgtc aagtacaata acatttttaa aagaaaatgg atcccactgt
2521 tcctctttgc cacagagaaa gcacccagac gccacaggct ctgtcgcatt tcaaaacaaa
2581 ccatgatgga gtggcggcca gtccagcctt ttaaagaacg tcaggtggag cagccaggtg
2641 aaaggcctgg cggggaggaa agtgaaacgc ctgaatcaaa agcagttttc taattttgac
2701 tttaaatttt tcatccgccg gagacactgc tcccatttgt ggggggacat tagcaacatc
2761 actcagaagc ctgtgttctt caagagcagg tgttctcagc ctcacatgcc ctgccgtgct
2821 ggactcagga ctgaagtgct gtaaagcaag gagctgctga gaaggagcac tccactgtgt
2881 gcctggagaa tggctctcac tactcacctt gtctttcagc ttccagtgtc ttgggttttt
2941 tatactttga cagctttttt ttaattgcat acatgagact gtgttgactt tttttagtta
3001 tgtgaaacac tttgccgcag gccgcctggc agaggcagga aatgctccag cagtggctca
3061 gtgctccctg gtgtctgctg catggcatcc tggatgctta gcatgcaagt tccctccatc
3121 attgccacct tggtagagag ggatggctcc ccaccctcag cgtcggggat tcacgctcca
3181 gcctccttct tggttgtcat agtgataggg tagccttatt gccccctctt cttataccct
3241 aaaaccttct acactagtgc catgggaacc aggtctgaaa aagtagagag aagtgaaagt
3301 agagtctggg aagtagctgc ctgtaactga gactagacgg aaaaggaata ctcgtgtatt
3361 ttaagatatg aatgtgactc aagactcgag gccgatacga ggctgtgatt ctgcctttgg
3421 atggatgttg ctgtacacag atgccacaga cttgtactaa cacaccgtaa tttggcattt
3481 gtttaacctc atttataaaa gcttcaaaaa aaccc
//