LOCUS AK075307 2306 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ90826 fis, clone Y79AA1001530, highly similar
to Tubulin beta-4 chain.
ACCESSION AK075307
VERSION AK075307.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2306)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..2306
/cell_line="Y79"
/cell_type="retinoblastoma"
/clone="Y79AA1001530"
/clone_lib="Y79AA1"
/db_xref="H-InvDB:HIT000082342"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 99..1433
/codon_start=1
/protein_id="BAG52106.1"
/translation="MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
ERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
KGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR
GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQ
SKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEGEFEEEAEEEVA"
BASE COUNT 463 a 814 c 567 g 462 t
ORIGIN
1 cgtgctccgc cgtctccgcc gcatcttcca ccctcgccgc cgccgcagct ccccgcgctc
61 gtgccaccgc cgccgcgtcc accctcagcg ccaccgccat gcgggagatc gtgcacctgc
121 aggccggcca gtgcggcaac cagatcgggg ccaagttttg ggaggttatc agtgacgaac
181 atggcatcga ccccacaggc acataccatg gggacagtga cctgcaactg gagaggatca
241 acgtgtacta caacgaggcc acaggaggaa attatgtccc cagagcggtg ctggtggacc
301 tggaacccgg caccatggac tctgtccgtt ctggcccctt cggtcagatc tttcggccgg
361 acaacttcgt gtttggccaa tccggagccg gcaacaactg ggcaaagggg cactacacgg
421 agggcgcaga gctggtggac gctgtcctgg acgtagtccg gaaggaggcc gagagctgcg
481 actgccttca gggcttccag ctgacccact cgctgggggg tggcacgggg tccggaatgg
541 gcacgctgct catcagtaag atccgcgagg agttcccaga ccgcatcatg aacaccttca
601 gcgtggtgcc ctcgcccaaa gtgtcagaca cggtggtgga gccctacaac gccacgctgt
661 ctgtgcacca gctggtggag aatacggatg agacctactg catcgacaat gaggcactct
721 acgacatctg tttccgcacc ctcaagctga ccacccccac ctacggggac ctcaaccacc
781 tggtgtcggc caccatgagc ggggtcacca cctgcctgcg cttcccgggc cagctgaacg
841 ccgacctgcg caagctggcc gtcaacatgg ttccctttcc tcgcctgcac ttcttcatgc
901 ccggcttcgc acccctgacc agccggggca gccagcagta ccgggccctg acggtgcccg
961 agctcaccca gcagatgttc gatgccaaga acatgatggc ggcgtgcgac ccgcgccacg
1021 gccgctacct gaccgtggcc gccgtgttcc ggggccgcat gtccatgaag gaggtggacg
1081 agcagatgct gagcgtgcag agcaagaaca gcagctactt cgtggagtgg atccccaaca
1141 acgtgaagac ggccgtgtgc gacatcccgc cccgcggcct gaagatggcc gcgaccttca
1201 tcggcaacag cacggccatc caggagctgt tcaagcgcat ctccgagcag ttcacggcca
1261 tgttccggcg caaggccttc ttgcactggt acacgggcga gggcatggac gagatggagt
1321 tcaccgaggc cgagagcaac atgaatgacc tggtatctga gtaccagcag taccaggacg
1381 ccacggccga ggagggcgag ttcgaggagg aggcggagga ggaggtggcc taggctgctc
1441 ccatcgcttc ccacctgtcc cctcgaggct tctgaccttt gatccgctag gccccccatc
1501 tctgaaccct agagccccgc tttccctcca aggctgactc cccgctgacc ctaacaatac
1561 ctttggagct cgctttacct ctggctactt catctccgac cctggctccc ctttgagccc
1621 taatttatct ttaaccccct tgagctcttc caaccttgac attcccagga ggagccccgc
1681 ttcacccctt ctgactctgg aaaccgcacc tctaactttg cagaccttcc ttcacccctg
1741 acttctgctt cacctctgac ctctgccccc catgaatccc attttacctc tagacctata
1801 agttctggtt tatgtttgac ccctccctct gagctgcact tcaccgctga ccttgcctca
1861 cctttaaccc cccacctgag ccccagctcc tacctctgac cccaacttct ctttgatctc
1921 tgaatcccct ctgactccaa cttctctttc accctctatg agtcccattt tacttctaca
1981 cctgcaagtc ctggtttata ttggacccct ccctccgagc tgcagttcac ctttgacctt
2041 gcctcacctt tcacccccca ccccccacag cgtcagctcc tacctctgac cccagcttct
2101 ctctgattcc cacaggcccc atgcatcctc cctgcctcac tcccctcagc ccctgccgac
2161 cttagcttat ctgggagaga aacaaggcct ggtgcctgta aggaagagag gtcaccccta
2221 ccctccctcc ccgcttccct gcctcaccct caataaataa attaattgtt gtcatggaaa
2281 aaaaaaaaaa aaaaaaaaaa aaaaaa
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