LOCUS AK075221 2395 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ90740 fis, clone PLACE1011045, highly similar
to Autophagy-related protein 7.
ACCESSION AK075221
VERSION AK075221.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2395)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..2395
/clone="PLACE1011045"
/clone_lib="PLACE1"
/db_xref="H-InvDB:HIT000082256"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 45..2156
/codon_start=1
/note="highly similar to Autophagy-related protein 7"
/protein_id="BAG52088.1"
/translation="MAAATGDPGLSKLQFAPFSSALDVGFWHELTQKKLNEYRLDEAP
KDIKGYYYNGDSAGLPARLTLEFSAFDMSAPTPARCCPAIGTLYNTNTLESFKTADKK
LLLEQAANEIWESIKSGTALENPVLLNKFLLLTFADLKKYHFYYWFCYPALCLPESLP
LIQGPVGLDQRFSLKQIEALECAYDNLCQTEGVTALPYFLIKYDENMVLVSLLKHYSD
FFQGQRTKITIGVYDPCNLAQYPGWPLRNFLVLAAHRWSSSFQSVEVVCFRDRTMQGA
RDVAHSIIFEVKLPEMAFSPDCPKAVGWEKNQKGGMGPRMVNLSECMDPKRLAESSVD
LNLKLMCWRLVPTLDLDKVVSVKCLLLGAGTLGCNVARTLMGWGVRHITFVDNAKISY
SNPVRQPLYEFEDCLGGGKPKALAAADRLQKIFPGVNARGFNMSIPMPGHPVNFSSVT
LEQARRDVEQLEQLIESHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVM
RHGLKKPKQQGAGDLCPNHPVASADLLGSSLFANIPGYKLGCYFCNDVVAPGDSTRDR
TLDQQCTVSRPGLAVVAGALAVELMVSVLQHPEGGYAIASSSDDRMNEPPTSLGLVPH
QIRGFLSRFDNVLPVSLAFDKCTACSSKVLDQYEREGFNFLAKVFNSSHSFLEDLTGL
TLLHQETQAAEIWDMSDDETI"
BASE COUNT 575 a 576 c 624 g 620 t
ORIGIN
1 agagagagct gtggttgccg gaagttgagc ggcggcaaga aataatggcg gcagctacgg
61 gggatcctgg actctctaaa ctgcagtttg ccccttttag tagtgccttg gatgttgggt
121 tttggcatga gttgacccag aagaagctga acgagtatcg gctggatgaa gctcccaagg
181 acattaaggg ttattactac aatggtgact ctgctgggct gccagctcgc ttaacattgg
241 agttcagtgc ttttgacatg agtgctccca ccccagcccg ttgctgccca gctattggaa
301 cactgtataa caccaacaca ctcgagtctt tcaagactgc agataagaag ctccttttgg
361 aacaagcagc aaatgagata tgggaatcca taaaatcagg cactgctctt gaaaaccctg
421 tactcctcaa caagttcctc ctcttgacat ttgcagatct aaagaagtac cacttctact
481 attggttttg ctatcctgcc ctctgtcttc cagagagttt acctctcatt caggggccag
541 tgggtttgga tcaaaggttt tcactaaaac agattgaagc actagagtgt gcatatgata
601 atctttgtca aacagaagga gtcacagctc ttccttactt cttaatcaag tatgatgaga
661 acatggtgct ggtttccttg cttaaacact acagtgattt cttccaaggt caaaggacga
721 agataacaat tggtgtatat gatccctgta acttagccca gtaccctgga tggcctttga
781 ggaatttttt ggtcctagca gcccacagat ggagtagcag tttccagtct gttgaagttg
841 tttgcttccg tgaccgtacc atgcaggggg cgagagacgt tgcccacagc atcatcttcg
901 aagtgaagct tccagaaatg gcatttagcc cagattgtcc taaagcagtt ggatgggaaa
961 agaaccagaa aggaggcatg ggaccaagga tggtgaacct cagtgaatgt atggacccta
1021 aaaggttagc tgagtcatca gtggatctaa atctcaaact gatgtgttgg agattggttc
1081 ctactttaga cttggacaag gttgtgtctg tcaaatgtct gctgcttgga gccggcacct
1141 tgggttgcaa tgtagctagg acgttgatgg gttggggcgt gagacacatc acatttgtgg
1201 acaatgccaa gatctcctac tccaatcctg tgaggcagcc tctctatgag tttgaagatt
1261 gcctaggggg tggtaagccc aaggctctgg cagcagcgga ccggctccag aaaatattcc
1321 ccggtgtgaa tgccagagga ttcaacatga gcatacctat gcctgggcat ccagtgaact
1381 tctccagtgt cactctggag caagcccgca gagatgtgga gcaactggag cagctcatcg
1441 aaagccatga tgtcgtcttc ctattgatgg acaccaggga gagccggtgg cttcctgccg
1501 tcattgctgc aagcaagaga aagctggtca tcaatgctgc tttgggattt gacacatttg
1561 ttgtcatgag acatggtctg aagaaaccaa agcagcaagg agctggggac ttgtgtccaa
1621 accaccctgt ggcatctgct gacctcctgg gctcatcgct ttttgccaac atccctggtt
1681 acaagcttgg ctgctacttc tgcaatgatg tggtggcccc aggagattca accagagacc
1741 ggaccttgga ccagcagtgc actgtgagtc gtccaggact ggccgtggtt gcaggagccc
1801 tggccgtgga attgatggta tctgttttgc agcatccaga agggggctat gccattgcca
1861 gcagcagtga cgatcggatg aatgagcctc caacctctct tgggcttgtg cctcaccaga
1921 tccggggatt tctttcacgg tttgataatg tccttcccgt cagcctggca tttgacaaat
1981 gtacagcttg ttcttccaaa gttcttgatc aatatgaacg agaaggattt aacttcctag
2041 ccaaggtgtt taattcttca cattccttct tagaagactt gactggtctt acattgctgc
2101 atcaagaaac ccaagctgct gagatctggg acatgagcga tgatgagacc atctgagatg
2161 gccccgctgt ggggctgact tctccccggc cgcctgctga ggagctctcc atcgccagag
2221 caggactgct gaccccaggc ctggtgattc tgggcccctc ctccataccc cgaggtctgg
2281 gattcccccc tctgctgccc aggagtggcc agtgttcggc gttgctcggg attcaagata
2341 ccaccagttc agagctaaat aataaccttg gccttggcct tgctattgac ctggg
//