LOCUS AK074888 2904 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ90407 fis, clone NT2RP2006269, highly similar
to Protein O-mannosyl-transferase 1 (EC2.4.1.109).
ACCESSION AK074888
VERSION AK074888.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2904)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..2904
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP2006269"
/clone_lib="NT2RP2"
/db_xref="H-InvDB:HIT000081923"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
2-weeks retinoic acid (RA) induction"
/organism="Homo sapiens"
CDS 197..2212
/codon_start=1
/protein_id="BAC11269.1"
/translation="MKQIFFLDDSGPPFGHMVLALGGYLGGFDGNFLWNRIGAEYSSN
VPVWSLRLLPALAGALSVPMAYQIVLELHFSHCAAMGAALLMLIENALITQSRLMLLE
SVLIFFNLLAVLSYLKFFNCQKHSPFSLSWWFWLTLTGVACSCAVGIKYMGVFTYVLV
LGVAAVHAWHLLGDQTLSNVCVFCHLLARAVALLVIPVVLYLLFFYVHLILVFRSGPH
DQIMSSAFQASLEGGLARITQGQPLEVAFGSQVTLRNVFGKPVPCWLHSHQDTYPMIY
ENGRGSSHQQQVTCYPFKDVNNWWIVKDPRRHQLVVSSPPRPVRHGDMVQLVHGMTTR
SLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWRLEIVNRGSDTDVWKTILSEVRFV
HVNTSAVLKLSGAHLPDWGYRQLEIVGEKLSRGYHGSTVWNVEEHRYGASQEQRERER
ELHSPAQVDVSRNLSFMARFSELQWRMLALRSDDSEHKYSSSPLEWVTLDTNIAYWLH
PRTSAQIHLLGNIVIWVSGSLALAIYALLSLWYLLRRRRNVHDLPQDAWLRWVLAGAL
CAGGWAVNYLPFFLMEKTLFLYLYLPALTFQILLLPVVLQHISDHLCRSQLQRSIFSA
LVVAWYSSACHVSNTLRPLTYGDKSLSPHELKALRWKDSWDILIRKH"
BASE COUNT 595 a 823 c 828 g 658 t
ORIGIN
1 gtctggcccc gcaggctcgg tgaatcgaac gttgagcagg gcggtgggtg gtgcggagtg
61 ccgagcggcc tcacccccaa ccgtcggccc agtcggacgg ttccgaggcg ttgccgggag
121 ccgggcgcgg ctctgtgtgg actcggagaa acgcggtttt gacgaagtat attatgggca
181 gtacatctct ttttacatga aacaaatctt cttcttggat gacagtgggc cgccatttgg
241 ccacatggtg ctggccttgg gaggttattt aggaggattc gatggcaatt ttttgtggaa
301 cagaattgga gcagaataca gtagcaacgt gcctgtgtgg tccctgcgcc tgctgccagc
361 actcgcgggg gccttgtcgg tccccatggc ctaccagata gtgttggagc tccacttttc
421 tcattgtgcc gccatgggag ctgctctgtt gatgcttatc gagaatgctc tcatcactca
481 gtcaaggcta atgcttttgg aatcagtgtt aatatttttc aatctattgg ccgtgttgtc
541 ctacctgaag ttcttcaact gccaaaagca cagccctttt tctctgagct ggtggttctg
601 gctaacactg acaggggtcg cttgttcctg tgcagtgggc atcaagtaca tgggtgtgtt
661 cacgtacgtg ctcgtgctgg gtgttgcagc tgtccatgcc tggcacctgc ttggagacca
721 gactttgtcc aatgtctgtg tgttctgtca cttgctcgcc cgagcagtgg ctttgctggt
781 catcccggtc gtcctgtact tactgttctt ctacgtccac ttgattctag tcttccgctc
841 tgggccccac gaccaaatca tgtccagtgc cttccaggcc agcttagagg gaggactagc
901 tcggatcacc cagggtcagc cactggaggt ggcctttggg tcccaggtca ctctgaggaa
961 cgtctttggg aaacctgtgc cctgctggct tcattcccac caggacacct accccatgat
1021 atatgagaac ggccgaggca gctcccacca gcaacaggtg acctgttacc ccttcaaaga
1081 cgtcaataac tggtggattg taaaggatcc caggaggcac cagctggtgg tgagcagccc
1141 tccgagacct gtgaggcacg gggacatggt gcagctggtc cacggcatga ccacccgctc
1201 cctgaacacg catgatgttg cagcccccct gagcccccat tcacaggagg tctcctgcta
1261 cattgactat aacatctcca tgcccgccca gaacctctgg agactggaaa ttgtgaacag
1321 aggatctgac acagacgtct ggaagaccat cctctcagag gtccgctttg tgcacgtgaa
1381 cacttccgct gtcttaaagc tgagcggggc tcacctccct gactgggggt atcggcaact
1441 ggagatcgtc ggggagaagc tgtcccgggg ctaccacggg agcacggtgt ggaacgtgga
1501 ggagcaccga tacggcgcga gccaggagca gagggagcgg gaacgggagc tgcactcacc
1561 tgcgcaggtg gacgtcagca ggaacctcag cttcatggcg agattctcgg agctgcagtg
1621 gaggatgctg gcgctgagaa gtgatgactc ggaacacaag tacagctcca gcccactgga
1681 gtgggtcacc ctggacacca atattgccta ctggctgcac cccaggacca gcgctcagat
1741 ccacctactt ggaaacatag tgatctgggt ttcgggcagc ctcgctctgg ccatctacgc
1801 cctgctgtcc ttgtggtacc tgctccgacg gcgaagaaat gtccatgacc tccctcagga
1861 tgcctggctg cgctgggtgc tggctggggc gctgtgtgcc ggtggctggg cagtgaacta
1921 cctcccgttc ttcctgatgg agaagacact cttcctctac ctctacctgc ccgcactcac
1981 cttccaaatc cttctgctcc ctgtggtcct gcagcacatc agcgaccacc tgtgcaggtc
2041 ccagctccag aggagcatct tcagcgccct ggtggtggcc tggtactcct ccgcgtgcca
2101 cgtgtccaac acgctgcgcc cactcaccta cggggacaag tcactctcgc cacatgaact
2161 caaggccctt cgctggaaag acagctggga catcttgatc cgaaaacact agaacaagag
2221 tgtggcaaag aacacccgtg ctgggttcgg gacgaggttg aagggtcttg gtcaatgtac
2281 gtaatgagca gggtgggccc cacgctggga ggacacgggc tgggctgagc agggcctcta
2341 gtggaacaca tgggggtctc attgaaaagc tctctgatga gcacctcctt ttgtgcaaag
2401 ttaatttttt ctcgacaata aagatattcc gtgtcttcac ccctgaacta agacacaggg
2461 agtatttcag aggccagcgt aggagtcatc gacaacgaaa agccgagaac ccagggccag
2521 cagtggagcc tcagcagacc agggcctggt ccttgctaat tgctgcaggg tggagtttga
2581 tctggcagac ccgatcctcc ttcatgaaca cccagcaacc tgagcaagtc ccagccctgc
2641 cctcagcgag cccggcaggc gtcctgggac agctcagtgt tggagggcca cctgaaccac
2701 gagccagggc tggggcttgc atgtcattgt ctatgacagc gtcaagactg gcccttggca
2761 ccgtgctgtg tggaaaccct cccctctgag actccactga gacgtggctg agtgaaatct
2821 tcctcgtcag tggtcaaggt gtgtcatcca tacagctcca tgcctttgtc ttttttaaat
2881 gtaattaaaa aaggaaccaa ctgg
//