LOCUS AK074753 1730 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ90272 fis, clone NT2RP1000050, highly similar
to Ceroid-lipofuscinosis neuronal protein 6.
ACCESSION AK074753
VERSION AK074753.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..1730
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP1000050"
/clone_lib="NT2RP1"
/db_xref="H-InvDB:HIT000081788"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pUC19FL3"
/note="mRNA from NT2 neuronal precursor cells after
48-hours retinoic acid (RA) induction"
/organism="Homo sapiens"
CDS 16..588
/codon_start=1
/protein_id="BAC11181.1"
/translation="MGASIHLVGDSVNHRLLFSGYQHHLSVRENPIIKNLEPETLIDS
FELLYYYDEYLGHCMWYIPFFLILFMYFSGCFTASKAESLIPGPALLLVAPSGLYYWY
LVTEGQIFILFIFTFFAMLALVLHQKRKRLFLDSNGLFLFSSFALTLLLVALWVAWLW
NDPVLRKKYPGVIYVPEPWAFYTLHVSSRH"
BASE COUNT 306 a 525 c 484 g 415 t
ORIGIN
1 atcatcatct tcatcatggg tgccagcatc cacctggtgg gtgactctgt caaccaccgc
61 ctgctcttca gtggctacca gcaccacctg tctgtccgtg agaaccccat catcaagaat
121 ctcgagccgg agacgctgat cgactccttt gagctgctct actattatga tgagtacctg
181 ggtcactgca tgtggtacat ccccttcttc ctcatcctct tcatgtactt cagcggctgc
241 tttactgcct ctaaagctga gagcttgatt ccagggcctg ccctgctcct ggtggcaccc
301 agtggcctgt actactggta cctggtcacc gagggccaga tcttcatcct cttcatcttc
361 accttcttcg ccatgctggc cctcgtcctg caccagaagc gcaagcgcct cttcctggac
421 agcaacggcc tcttcctctt ctcctccttc gcactgaccc tcttgcttgt ggcgctctgg
481 gtcgcctggc tgtggaatga ccctgttctc aggaagaagt acccgggtgt catctacgtc
541 cctgagccct gggctttcta cacccttcac gtcagcagtc ggcactgagt ccctggcacc
601 aggctctggc gctctgctgg gtgggagggt gggccatgga gggcatctga atacaggagt
661 agggggggtg tgggtgtgta accagagacc gagagcatga gtggggtgtg cctcgtgtgc
721 gtggattcgt gtgtgtgtgt gtgtcttgta tatgtgtgcg cagagtgcat cattttcaga
781 ctctactatt tccgtcaagt ttctgtttga tttggatcat ctcaggatcg gattctgttt
841 tagagtgttt ctgggccagg atccgggccc ctgccctcct ctgcacctga ccacactccc
901 tactcagggc tagtctgttc ttcccggaca tcttctggta gccgtgcagg agagggctgg
961 gtggggcaga ggccaggagg ggacctggtg tgtcacctgc ccaccacctg gctcatccct
1021 caggcccacc ctgaccctac attacatagg ttacgtcagc ctactgtggc tgttgagcaa
1081 agcatttctc ctttctgggc ctcatttgca ctagatgggc ctgtggtccc aaagtaggtc
1141 agtaggttgg ggttgctgac accccttggg tgcagctttg ggacagatga gtggctctgt
1201 cctgtcactg ccctctccct gcctgggggc tatgtgcact ccagacccct gcccaggctc
1261 aggcccatga ggtatggaga caccctggcc cccaggagct ggaggcaccg cccactcccc
1321 tggcattcca gctttgcagg tgaccctcct ctacccaaag ctctgtcccc ctgctcccac
1381 tccagaagaa ctgcggcacg tgcttcgggc agcctagcca caggctttga gcgcctgcat
1441 tcctgggggc tggagggtgg ggtgccaaag gccctgagca aaagccagag ctcctctcat
1501 caaagccttt acaaggtgct gggcccagag gctttgcctt gacagagtgg cccagggttt
1561 caagggagga ggaacctccc cctacctagg acccttcctg tggggggtct acagagtcag
1621 ggacagaagg gaagggaccc acaggaagtc acagtggtgc ccagggatgt gtcagccccc
1681 agccacgggg acgcgggatt caagaatgaa gtaaatacag tcacagcccc
//