LOCUS AK074530 2097 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ90049 fis, clone HEMBA1002421, highly similar
to Syndecan-2 precursor.
ACCESSION AK074530
VERSION AK074530.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..2097
/clone="HEMBA1002421"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000081565"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 405..1010
/codon_start=1
/protein_id="BAG51965.1"
/translation="MRRAWILLTLGLVACVSAESRAELTSDKDMYLDNSSIEEASGVY
PIDDDDYASASGSGTDEDVESPELTTSRPLPKILLTSAAPKVETTTLNIQNKIPAQTK
SPEETDKEKVHLSDSERKMDPAEEDTNVYTEKHSDSLFKRTEVLAAVIAGGVIGFLFA
IFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA"
BASE COUNT 596 a 424 c 466 g 611 t
ORIGIN
1 aaacttctgc cgtagctccc tttcaagcca gcgaatttat tccttaaaac cagaaactga
61 acctcggcac gggaaaggag tccgcggagg agcaaaacca cagcagagca agaagagctt
121 cagagagcag ccttcccgga gcaccaactc cgtgtcggga gtgcagaaac caacaagtga
181 gagggcgccg cgttcccggg gcgcagctgc gggcggcggg agcaggcgca ggaggaggaa
241 gcgagcgccc ccgagccccg agcccgagtc cccgagcctg agccgcaatc gctgcggtac
301 tctgctccgg attcgtgtgc gcgggctgcg ccgagcgctg ggcaggaggc ttcgttttgc
361 cctggttgca agcagcggct gggagcagcc ggtccctggg gaatatgcgg cgcgcgtgga
421 tcctgctcac cttgggcttg gtggcctgcg tgtcggcgga gtcgagagca gagctgacat
481 ctgataaaga catgtacctt gacaacagct ccattgaaga agcttcagga gtgtatccta
541 ttgatgacga tgactacgct tctgcgtctg gctcgggaac tgatgaggat gtagagagtc
601 cagagctgac aacatctcga ccacttccaa agatactgtt gactagtgct gctccaaaag
661 tggaaaccac gacgctgaat atacagaaca agatacctgc tcagacaaag tcacctgaag
721 aaactgataa agagaaagtt cacctctctg actcagaaag gaaaatggac ccagccgaag
781 aggatacaaa tgtgtatact gagaaacact cagacagtct gtttaaacgg acagaagtcc
841 tagcagctgt cattgctggt ggagttattg gctttctctt tgcaattttt cttatcctgc
901 tgttggtgta tcgcatgaga aagaaggatg aaggaagcta tgaccttgga gaacgcaaac
961 catccagtgc tgcttatcag aaggcaccta ctaaggagtt ttatgcgtaa aactccaact
1021 tagtgtctct atttatgaga tcactgaact tttcaaaata aagcttttgc atagaataat
1081 gaagatcttt gttttttgtt ttcattaaag agccattctg gcactttaat gataaaatcc
1141 cattgtattt aaaacatttc atgtatttct ttagaacaac ataaaattaa aatttaacat
1201 ctgcagtgtt ctgtgaatag cagtggcaaa atattatgtt atgaaaaccc tcgatgttca
1261 tggaattggt ttaaactttt atgcgcaaat acaaaatgat tgtctttttc ctatgactca
1321 aagatgaaag ctgtttcatt tgtgtcagca tgtctcagat tgaccttacc aagttggtct
1381 tactttgtta atttatctgt tgtccccttc ctctcctctg ccctcccttc ttgtgccctt
1441 aaaaccaaac cctatgcctt ttgtagctgt catggtgcaa tttgtctttg gaaaattcag
1501 ataatggtaa tttagtgtat atgtgatttt caaatatgta aactttaact tccactttgt
1561 ataaattttt aagtgtcaga ctatccattt tacacttgct ttatttttca ttacctgtag
1621 ctttgggcag atttgcaaca gcaaattaat gtgtaaaatt ggattattac tacaaaaccg
1681 tttagtcata tctatctaat cagatcttct tttgggagga tttgatgtaa gttactgaca
1741 agcctcagca aacccaaaga tgttagcagt attttaagaa gttgctgcag attcctttgg
1801 ccactgtatt tgttaatttc ttgcaatttg aaggtacgag tagaggttta aagaaaaatc
1861 agtttttgtt cttaaaaatg catttaagtt gtaaacgtct ttttaagcct ttgaagtgcc
1921 tctgattcta tgtaacttgt tgcagactgg tgttaatgag tatatgtaac agtttaaaaa
1981 aaaagttggt attttataag cacagacaat tctaatggta acttttgtag tcttatgaat
2041 agacataaat tgtaatttgg gaacataaaa actactgaat aaatcatgtg gcctaat
//