LOCUS AK057726 1952 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ33164 fis, clone UTERU2000542, highly similar
to Squalene synthetase (EC 2.5.1.21).
ACCESSION AK057726
VERSION AK057726.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..1952
/clone="UTERU2000542"
/clone_lib="UTERU2"
/db_xref="H-InvDB:HIT000014333"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="uterus"
CDS 674..1594
/codon_start=1
/note="highly similar to Squalene synthetase (EC
2.5.1.21)"
/protein_id="BAG51957.1"
/translation="MESKEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMA
EFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQK
TNIIRDYLEDQQGGREFWPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNALHHIP
DVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFKGAVKIRKGQAVTLMMDAT
NMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNLPNCQLISRSHYSPIYL
SFVMLLAALSWQYLTTLSQVTEDYVQTGEH"
BASE COUNT 532 a 468 c 464 g 488 t
ORIGIN
1 aaaaacggtg gcaacacgct gggtttgctt tacaacgcct gggaagcttt gttgtttgca
61 ataaatttta atacttgtct gtttcggtct gcactgcctt tatgagctgt aacactcacg
121 gggtaggttt gcagcttcac tcctgaagcc agtaagacaa cgaacccact gggagaaaca
181 aacaactcca gacgcgccga cttaagagct ataatactcg ctgtgacggt ctgcagcttc
241 actcctgagc cagcgagacc acgaacccac cagaaggaag aaactccgaa cacatctgaa
301 catcagaagg aacagactcc ggacacgccg cctttaagaa ctgtaacact caccgcgagg
361 gtgggcggtt tcattcctga agtcagtgag accaagaacc aaccaattcc ggacacactt
421 ggactcgaca gactctaagg actcgctcag cagcagcctg aaaacttgct acaagtatct
481 caatcagacc agtcgcagtt tcgcagctgt tatccaggcg ctggatgggg aaatgcgcaa
541 cgcagtgtgc atattttatc tggttctccg agctctggac acactggaag atgacatgac
601 catcagtgtg gaaaagaagg tcccgctgtt acacaacttt cactctttcc tttaccaacc
661 agactagcgg ttcatggaga gcaaggagaa ggatcgccag gtgctggagg acttcccaac
721 gatctccctt gagtttagaa atctggctga gaaataccaa acagtgattg ccgacatttg
781 ccggagaatg ggcattggga tggcagagtt tttggataag catgtgacct ctgaacagga
841 gtgggacaag tactgccact atgttgctgg gctggtcgga attggccttt cccgtctttt
901 ctcagcctca gagtttgaag accccttagt tggtgaagat acagaacgtg ccaactctat
961 gggcctgttt ctgcagaaaa caaacatcat ccgtgactat ctggaagacc agcaaggagg
1021 aagagagttc tggcctcaag aggtttggag caggtatgtt aagaagttag gggattttgc
1081 taagccggag aatattgact tggccgtgca gtgcctgaat gaacttataa ccaatgcact
1141 gcaccacatc ccagatgtca tcacctacct ttcgagactc agaaaccaga gtgtgtttaa
1201 cttctgtgct attccacagg tgatggccat tgccactttg gctgcctgtt ataataacca
1261 gcaggtgttc aaaggggcag tgaagattcg gaaagggcaa gcagtgaccc tgatgatgga
1321 tgccaccaat atgccagctg tcaaagccat catatatcag tatatggaag agatttatca
1381 tagaatcccc gactcagacc catcttctag caaaacaagg cagatcatct ccaccatccg
1441 gacgcagaat cttcccaact gtcagctgat ttcccgaagc cactactccc ccatctacct
1501 gtcgtttgtc atgcttttgg ctgccctgag ctggcagtac ctgaccactc tctcccaggt
1561 aacagaagac tatgttcaga ctggagaaca ctgatcccaa atttgtccat agctgaagtc
1621 caccataaag tggatttact ttttttcttt aaggatggat gttgtgttct ctttattttt
1681 ttcctactac tttaatccct aaaagaacgc tgtgtggctg ggacctttag gaaagtgaaa
1741 tgcaggtgag aagaacctaa acatgaaagg aaagggtgcc tcatcccagc aacctgtcct
1801 tgtgggtgat gatcactgtg ctgcttgcgg ctcatggcag agcattcagt gccacggttt
1861 aggtgaagtc gctgcatatg tgactgtcat gagatcctac ttagtatgat cctggctaga
1921 atgataatta aaagtattta atttgaagca cc
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