LOCUS AK057580 2813 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ33018 fis, clone THYMU1000459, highly similar
to Homo sapiens transcription factor 7 (T-cell specific, HMG-box)
(TCF7), transcript variant 5, mRNA.
ACCESSION AK057580
VERSION AK057580.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2813)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2813
/clone="THYMU1000459"
/clone_lib="THYMU1"
/db_xref="H-InvDB:HIT000014194"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thymus"
CDS 594..1142
/codon_start=1
/note="highly similar to Homo sapiens transcription
factor 7 (T-cell specific, HMG-box) (TCF7), transcript
variant 5, mRNA"
/protein_id="BAG51937.1"
/translation="MGQLPHTVSWFTHPSLMLGSGVPGHPAAIPHPAIVPPSGKQELQ
PFDRNLKTQAESKAEKEAKKPTIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILG
RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKRRSREKHQESTTGGKR
NAFGTYPEKAAAPAPFLPMTVL"
BASE COUNT 694 a 876 c 690 g 553 t
ORIGIN
1 gacagaattg gccaaggttt cttggttgga gggcgggggg tgggaggtca agtaggggcc
61 acctcgggga ggcctgccct ccaggtcctt cccctaaaac ttggcactgc cgatactccc
121 agcccgttcc ttcccaagtc aggaacttgc aggggacccc ttggcaattc tttttctctc
181 aagagcagac agccttcagt cccagccgct gccagggctg gtgtgtctga cccagctgta
241 gtttttccag gcctgaaggc cccggagtgc accagcggca tgtacaaaga gaccgtctac
301 tccgccttca atctgctcat gcattaccca cccccctcgg gagcagggca gcacccccag
361 ccgcagcccc cgctggtaag tggaccccgc agccagtgcc gccctgtgct tgcagcctcc
421 ttgaccagca caaggccaat cagccccccc acggtgtccc ccaactctct ctctacgaac
481 atttcaacag cccacatccc acccctgcac ctgcggacat cagccagaag caagttcaca
541 ggcctctgca gacccctgac ctctctggct tctactccct gacctcaggc agcatggggc
601 agctccccca cactgtgagc tggttcaccc acccatcctt gatgctaggt tctggtgtac
661 ctggtcaccc agcagccatc ccccacccgg ccattgtgcc cccctcaggg aagcaggagc
721 tgcagccctt cgaccgcaac ctgaagacac aagcagagtc caaggcagag aaggaggcca
781 agaagccaac catcaagaag cccctcaatg ccttcatgct gtacatgaag gagatgagag
841 ccaaggtcat tgcagagtgc acacttaagg agagcgctgc catcaaccag atcctgggcc
901 gcaggtggca cgcgctgtcg cgagaagagc aggccaagta ctatgagctg gcccgcaagg
961 agaggcagct gcacatgcag ctatacccag gctggtcagc gcgggacaac tacgggaaga
1021 agaagaggcg gtcgagggaa aagcaccaag aatccaccac aggaggaaaa agaaatgcat
1081 tcggtactta cccggagaag gccgctgccc cagccccgtt ccttccgatg acagtgctct
1141 aggctgcccc cgggtcccca gctccccagg actcaccctc ataccatctg ctgccccgct
1201 tccccacaga actgcttact agccctgcgg agccggcacc tacatcccca ggtctctcca
1261 ctgctctcag cctcccaacc ccagggcccc cacaggcccc ccgcagcacc ctgcagagca
1321 cacaggtaca gcaacaggaa tctcagagac aggtggccta gcaggcacag gacacctggc
1381 cgcctccagg agcctacccc ctgaaagtga cagagaccca gatctcatgg aaactggcca
1441 ggggtcctgt taacgtcatc tcagggtcca gaccctgaag atttcagagg ctgcagaact
1501 tctgcctgaa cctggggtca tcgattcaaa ctgctccaag tggtgggaat cagatctgtc
1561 ttgatgtgtc atctaattaa gggaatccct tgtacctatg gctgcctgca tctattcttt
1621 gtaccatctg tcttgccagc cagaagcctc tgcctcccta gcttttctgc tataggtcag
1681 agatgggctg aactgagcct agctaccttc tctacccatc tcccccatcc cccactgcca
1741 caccctcccc attcagacac ttcatggacc aagaatgagc tggtttgtca aacaacatgt
1801 gagcatggtc acaagcacaa agctcaagat gacagctctt ctaaggaaat ggagaagctc
1861 tgtttataaa aacaaaaaca aaaccagctg ctactcataa gttggaccag aggaagcccc
1921 ttactatgat ctcaggagct tgcaagaagc aggaagggga atggaatagg ttaagtttag
1981 gcctatcaac ctaagcaaca gaaataatct gacactacct tatcaggcaa attggggagg
2041 ggagggtgta tctagctcta gttcaaatta tttggaagtg ttccctgaga aacccaccag
2101 cctaagaagc tctggcccca ggcttgtcac tagcagctgc agtcaacagt tcaaagaagt
2161 catggcccaa atccagtgtg cacccctccc cattcacaga gcctttttca caattccatt
2221 tccagttcat ctatggcagt ccagccagct cctgggcagc ttgagagggc aaacccaaaa
2281 cctcatgaca gccagagcct gtctttcagc attcagtccg cctggccggc tccagtttcc
2341 ccatggggct gcgggacaga ggaccattac aactagatca aggagcccag aaaacctcca
2401 gtagtggaca acaggttttc accatagcct acgttaaccc atttttgagc caagcttcaa
2461 ccctcagcct tgaaaaacaa gtctttaatt taatttttgt tttttgccta aatccaaaga
2521 aaaagggctg ccgggccagg cgcggtggct cacgcctgta atcccagcac tttggcaggc
2581 cgaggcaggt ggatcacctg acgtcagtag tttgagacca gcctggccaa catggtgaaa
2641 ccctgtatct actaaaaata caaaaattag ccggacgtgg tggtgcgcgc atgtaatccc
2701 agctactcgg gaggctgagg cggaagaatc acttgaaccc gggaggcgga ggttccagtg
2761 agccgagatg gcgctattgc actccagtct gggtaacagg gagactgcat ctc
//