LOCUS AK057278 2300 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32716 fis, clone TESTI2000808, highly similar
to Contactin-4 precursor.
ACCESSION AK057278
VERSION AK057278.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2300)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2300
/clone="TESTI2000808"
/clone_lib="TESTI2"
/db_xref="H-InvDB:HIT000013892"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="testis"
CDS 69..2165
/codon_start=1
/note="highly similar to Contactin-4 precursor"
/protein_id="BAG51896.1"
/translation="MEENVFWECKANGRPKPTYKWLKNGEPLLTRDRIQIEQGTLNIT
IVNLSDAGMYQCLAENKHGVIFSNAELSVIAVGPDFSRTLLKRVTLVKVGGEVVIECK
PKASPKPVYTWKKGRDILKENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASS
TGNLVVKDPTRVMVPPSSMDVTVGESIVLPCQVTHDHSLDIVFTWSFNGHLIDFDRDG
DHFERVGGQDSAGDLMIRNIQLKHAGKYVCMVQTSVDRLSAAADLIVRGPPGPPEAVT
IDEITDTTAQLSWRPGPDNHSPITMYVIQARTPFSVGWQAVSTVPELIDGKTFTATVV
GLNPWVEYEFRTVAANVIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVITW
ETVPEELQNGRGFGYVVAFRPYGKMIWMLTVLASADASRYVFRNESVHPFSPFEVKVG
VSNNKGEGPFSPTTVVYSAEEEPTKPPASIFARSLSATDIEVFWASPLEKNRGRIQGY
EVKYWRHEDKEENARKIRTVGNQTSTKITNLKGSVLYHLAVKAYNSAGTGPSSATVNV
TTRKPPPSQPPGNIIWNSSDSKIILNWDQVKALDNESEVKGYKVLYRWNRQSSTSVIE
TNKTSVELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGASTSNACTL
SAISTIMISLTARSSL"
BASE COUNT 716 a 484 c 541 g 559 t
ORIGIN
1 ataccagatg gaggctttga tctgctcaac ctaattggat tcaaaaaata aatgatattc
61 acgtggccat ggaagaaaat gtcttttggg aatgtaaagc aaatggaagg cctaagccta
121 catacaagtg gctaaaaaat ggcgaacctc tgctaactcg ggatagaatt caaattgagc
181 aaggaacact caacataaca atagtgaacc tctcagatgc tggcatgtat cagtgtttgg
241 cagagaataa acatggagtt atcttttcca acgcagagct tagtgttata gctgtaggtc
301 cagatttttc aagaacactc ttgaaaagag taactcttgt caaagtggga ggtgaagttg
361 tcattgagtg taagccaaaa gcgtctccaa aacctgttta cacctggaag aaaggaaggg
421 atatattaaa agaaaatgaa agaattacca tttctgaaga tggaaacctc agaatcatca
481 acgttactaa atcagacgct gggagttata cctgtatagc cactaaccat tttggaactg
541 ctagcagtac tggaaacttg gtagtgaaag atccaacaag ggtaatggta cccccttcca
601 gtatggatgt cactgttgga gagagtattg ttttaccgtg ccaggtaacg catgatcact
661 cgctagacat cgtgtttact tggtcattta atggacacct gatagacttt gacagagatg
721 gggaccactt tgaaagagtt ggagggcagg attcagctgg tgatttgatg atccgaaaca
781 tccaactgaa gcatgctggg aaatatgtct gcatggtcca aacaagtgtg gacaggctat
841 ctgctgctgc agacctgatt gtaagaggtc ctccaggtcc cccagaggct gtgacaatag
901 acgaaatcac agataccact gctcagctct cctggagacc cgggcctgac aatcacagcc
961 ccatcaccat gtatgtcatt caagccagga ctccgttctc cgtgggctgg caagcagtca
1021 gtacagtccc agaactcatt gatgggaaga cattcacagc gaccgtggtg ggtttgaacc
1081 cttgggttga atatgaattc cgcacagttg cagccaacgt gattgggatt ggggagccca
1141 gccgcccctc agagaaacgg agaacagaag aagctctccc cgaagtcaca ccagcgaatg
1201 tcagtggtgg cggaggcagc aaatctgaac tggttataac ctgggagacg gtccctgagg
1261 aattacagaa tggtcgtggc tttggttatg tggtggcctt ccggccctac ggtaaaatga
1321 tctggatgct gacagtgctg gcctcagctg acgcctctag atacgtgttc aggaatgaga
1381 gcgtgcaccc cttctctccc tttgaggtta aagtaggtgt ctccaacaac aaaggagaag
1441 gccctttcag tcccaccacg gtggtgtatt ctgcagaaga agaacccacc aaaccaccag
1501 ccagtatctt tgccagaagt ctttctgcca cagatattga agttttctgg gcctccccac
1561 tggagaagaa tagaggacga atacaaggtt atgaggttaa atattggaga catgaagaca
1621 aagaagaaaa tgctagaaaa atacgaacag ttggaaatca gacatcaaca aaaatcacga
1681 acttaaaagg cagtgtgctg tatcacttag ctgtcaaggc atataattct gctgggacag
1741 gcccctctag tgcaacagtc aatgtgacaa cccgaaagcc accaccaagt caaccccccg
1801 gaaacatcat atggaattca tcagactcca aaattatcct gaattgggat caagtgaagg
1861 ccctggataa tgagtcggaa gtaaaaggat acaaagtctt gtacagatgg aacagacaaa
1921 gcagcacatc tgtcattgaa acaaataaaa catcggtgga gctttctttg cctttcgatg
1981 aagattatat aatagaaatt aagccattca gcgacggagg agatggcagc agcagtgaac
2041 aaattcgaat tccaaagata tcaaatgcct acgcgagagg atctggggct tccacttcga
2101 atgcatgtac gctgtcagcc atcagtacaa taatgatttc cctcacagct aggtccagtt
2161 tatgacaaaa gttatctgaa ggacttgctg tttataatat aagcaacatt tagctagttg
2221 ttttgaagac acccagtact aagtaatatt gttgttcaag tacatcttat tactggaata
2281 aaaatgtttt ttgcttcttt
//