LOCUS AK057039 2903 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ32477 fis, clone SKNMC2000698, highly similar
to Mus musculus ndrp mRNA for neuronal differentiaion related
protein.
ACCESSION AK057039
VERSION AK057039.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2903)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Kawakami,B., Sugiyama,A., Takemoto,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Suzuki,Y., Sugano,S., Nagahari,K.,
Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2903
/cell_line="SK-N-MC"
/cell_type="neuroepithelioma"
/clone="SKNMC2000698"
/clone_lib="SKNMC2"
/db_xref="H-InvDB:HIT000013653"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 169..>2903
/codon_start=1
/protein_id="BAB71353.1"
/translation="MPCERKGLSELRSELYFLIARFLEDGPCQQAAQVLIREVAEKEL
LPRRTDWTGKEHPRTYQNLVKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPGVQTLLG
AGRQSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADTLFSRKLNGKYR
LERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLL
ATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFS
PLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGM
FLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIW
QFKRREWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKV
WNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNM
IEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLI
RDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREEQLIPQMGVT
SSGLNQVLSQQANQEISPLDSMIQRLQQEQDLRRSGEAGISNTSRLSRGSISSTSEVH
SPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVVVPELSAGVASRQEEWR
TAKGEEEIKTYRSEEKRKHLTVPKENKIPIVSKNHAHEHFLDLGESKKQQTNQHNYRT
RSALEETPRPSEEIENGSSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWT
ADAGINLQPPKKVPKNKTKKAESSSDEEEESEKQKQKQIKKEKKKVNEEKDGPISP"
BASE COUNT 876 a 609 c 706 g 712 t
ORIGIN
1 gttgtttcct cctcctcctc ctccgcctcc gccgccgttg cttgaatggt ggagccgaag
61 ctcggctcgt gaacacacac tgacagctat agggcaggcg gcggcaccgt ccccgcttcc
121 cctcggcggc ggggtgtccc gtcggcggcc ctgaagtgac ccataaacat gccttgtgag
181 aggaaaggcc tctcggagct gcgatcggag ctctacttcc tcatcgcccg gttcctggaa
241 gatggaccct gtcagcaggc ggctcaggtg ctgatccgcg aggtggccga gaaggagctg
301 ctgccccggc gcaccgactg gaccgggaag gagcatccca ggacctacca gaatctggtg
361 aagtattaca gacacttagc acctgatcac ttgctgcaaa tatgtcatcg actaggacct
421 cttcttgaac aagaaattcc tcaaagtgtt cctggagtac aaactttatt aggagctgga
481 agacagtctt tactacgcac aaataaaagc tgcaagcatg ttgtgtggaa aggatctgct
541 ctggccgcgt tgcactgtgg aagaccacct gagtcaccag ttaactatgg tagcccaccc
601 agcattgcgg atactctgtt ttcaaggaag ctgaatggga aatacagact tgagcgactt
661 gttccaactg cagtgtatca gcacatgaaa atgcataaac gaattcttgg acacttgtca
721 tctgtgtact gtgtaacttt tgatcgaact ggcagacgga tatttactgg ttctgatgac
781 tgtcttgtga aaatatgggc aacagatgat gggaggttgt tagctacctt aagaggacat
841 gctgctgaaa tatcagacat ggctgtaaac tatgagaata ccatgatagc agctggaagt
901 tgtgataaaa tgatccgagt ctggtgtctt cgaacctgtg cacctttggc tgttcttcag
961 ggccatagtg catctattac atcactacag ttctcaccat tgtgcagtgg ctcaaagaga
1021 tatctatctt ctactggggc agatggcact atttgttttt ggctctggga tgctggaacc
1081 cttaaaataa acccaagacc tgcaaaattt acagagcgcc ctcggcctgg agttcaaatg
1141 atctgttctt cttttagtgc tggtggaatg tttctggcga cgggaagcac agatcatatt
1201 attcgggttt atttttttgg atcaggtcag ccagagaaaa tatcagaatt ggagtttcat
1261 actgacaaag ttgacagtat ccagttttcc aacactagta acaggtttgt aagtggcagt
1321 cgtgatggga cagcacgtat ttggcaattt aaacgaagag agtggaagag cattttgttg
1381 gatatggcta ctcgtccagc aggccaaaac cttcaaggaa tagaagataa aatcacaaaa
1441 atgaaggtta ctatggtagc ttgggatcga catgacaata cagttataac tgcagttaat
1501 aacatgactc tgaaagtttg gaattcttac actggtcaac taattcatgt cctgatgggt
1561 catgaagatg aggtatttgt tcttgaacca cacccgttcg atcctagagt tctcttttct
1621 gctggtcatg atggaaacgt gatagtgtgg gatctggcaa gaggagtcaa aatacgatct
1681 tatttcaata tgattgaagg ccaaggacat ggcgcagtat ttgactgcaa atgctctcct
1741 gatggtcagc attttgcatg cacagactct catggacatc ttttaatttt tggctttggg
1801 tccagtagca aatatgacaa gatagcagat cagatgttct ttcatagtga ttatcggcca
1861 cttattcgtg atgccaacaa ttttgtatta gatgaacaga ctcagcaagc acctcatctt
1921 atgcctcccc cttttttggt tgatgttgat ggtaaccctc atccatcaag atatcaaaga
1981 ttagttcctg gccgtgaaaa ttgcagggag gagcaactca tccctcagat gggagtaact
2041 tcctcaggac tgaatcaagt tttaagtcag caagcaaacc aggagatcag cccactggac
2101 agcatgattc aaagactaca acaggagcaa gacctgagac gttctggtga agcaggtatc
2161 agtaatacca gccgtttaag tagaggctcc ataagttcta cctcagaggt tcattcacca
2221 ccaaacgtag gactaagacg tagtggacaa attgaaggtg tacggcaaat gcacagcaac
2281 gcaccaagaa gtgaaatagc cacagagcgg gatctggtag cttggagtcg aagggtggta
2341 gtacccgagc tatcagctgg tgtagccagt aggcaagaag aatggagaac tgcaaaggga
2401 gaagaagaaa taaagactta caggtcagaa gagaaaagaa aacacttaac tgttccaaaa
2461 gagaataaaa tacccattgt ctcaaagaat catgctcatg agcatttcct ggatcttgga
2521 gaatccaaaa agcaacagac aaatcaacac aattatcgta caagatctgc attggaagag
2581 actcctagac cctcagaaga gatagaaaat ggcagtagtt cttcagatga aggcgaagta
2641 gttgctgtca gtggtggaac atccgaagaa gaagagagag catggcacag tgatggcagt
2701 tctagtgact actccagtga ttactctgac tggacagcag atgcaggaat taatctgcag
2761 ccaccaaaga aagttcctaa gaataaaacc aagaaagcag aaagcagttc agatgaagaa
2821 gaagaatctg aaaaacagaa gcaaaaacag attaaaaagg aaaagaaaaa agtaaatgaa
2881 gaaaaagatg gaccaatatc acc
//