LOCUS AK056977 1269 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32415 fis, clone SKMUS2000724, highly similar
to 2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-).
ACCESSION AK056977
VERSION AK056977.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1269)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..1269
/clone="SKMUS2000724"
/clone_lib="SKMUS2"
/db_xref="H-InvDB:HIT000013591"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="skeletal muscle"
CDS 107..1120
/codon_start=1
/note="highly similar to 2-hydroxyphytanoyl-CoA lyase (EC
4.1.-.-)"
/protein_id="BAG51836.1"
/translation="MPDSNFAERSEEQVSGAKVIAQALKTQDVEYIFGIVGIPVTEIA
IAAQQLGIKYIGMRNEQAVDICAEELGNNVKPAVTLLGNIHAVTKQLLEELDKTPWQY
PPESKWWKTLREKMKSNEAASKELASKKSLPMNYYTVFYHVQEQLPRDCFVVSEGANT
MDIGRTVLQNYLPRHRLDAGTFGTMGVGLGFAIAAAVVAKDRSPGQWIICVEGDSAFG
FSGMEVETICRYNLPIILLVVNNNGIYQGFDTDTWKEMLKFQDATAVVPPMCLLPNSH
YEQVMTAFGGKGYFVQTPEELQKSLRQSLADTTKPSLINIMIEPQATRKAQDFHWLTR
SNM"
BASE COUNT 381 a 251 c 307 g 330 t
ORIGIN
1 agaggtgcag taccagaggt ggcgtgctgc cgacttcgcg tttgccttgc tggatgattc
61 cgcttgtttg ccggctgcgt gagtgcttag agcttttcgg tggaagatgc cggacagtaa
121 cttcgcagag cgcagcgagg agcaggtgtc tggtgctaaa gtcatcgctc aggccctgaa
181 aacgcaagat gtggagtaca tatttggcat cgtaggcatc ccagtgaccg aaatcgccat
241 tgctgcccag cagctaggca tcaagtacat cgggatgagg aatgagcaag cggttgatat
301 ctgtgcagaa gaattgggga ataatgtaaa gcccgctgtt actttgctag gaaacataca
361 tgctgtcact aagcagcttt tagaggaact tgataaaaca ccatggcagt atcctccaga
421 gagcaagtgg tggaaaactc tgagagaaaa aatgaagagc aatgaagctg catccaagga
481 actagcttct aaaaaatccc tacctatgaa ttattacaca gtattctacc atgttcaaga
541 acaactacct agagactgtt tcgtggtaag tgaaggagca aatactatgg acattggacg
601 gactgtgctt cagaactacc ttcctcgtca caggcttgat gctggtactt tcggaacaat
661 gggagttggt ttgggatttg ctattgcagc tgccgtggtg gctaaagata gaagccctgg
721 gcaatggatc atctgtgtgg aaggagacag tgcatttggg ttttctggca tggaggtaga
781 aaccatctgc aggtacaact tgccaatcat actgttggta gtgaataaca atggaattta
841 ccaaggtttt gatacagata cttggaaaga aatgttaaaa tttcaagatg ctactgcagt
901 ggtccctcca atgtgtttgc tgccaaattc acattatgag caagtcatga ctgcatttgg
961 aggcaaaggg tattttgtac aaacaccaga agaactccaa aaatccctga ggcagagcct
1021 agcagacaca actaaacctt ctcttatcaa catcatgatt gagccacaag ccacacggaa
1081 ggcccaggat tttcattggc tgacccgctc taatatgtaa ataaagacgc cagttggtgg
1141 tcttgagttt tctctttctt gcaagatgaa attttatttt ccacagcaaa attactctac
1201 tgttaaaatt gtgcaaaata aaataaacat ttaaaatgac attttacagt aaaggaattg
1261 attaaaaac
//