LOCUS AK056878 2784 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32316 fis, clone PROST2003338, highly similar
to Homo sapiens tetratricopeptide repeat domain 19 (TTC19), mRNA.
ACCESSION AK056878
VERSION AK056878.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2784)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2784
/clone="PROST2003338"
/clone_lib="PROST2"
/db_xref="H-InvDB:HIT000013492"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 19..1524
/codon_start=1
/note="highly similar to Homo sapiens tetratricopeptide
repeat domain 19 (TTC19), mRNA"
/protein_id="BAG51820.1"
/translation="MAQPHTTSVPYFARSPAPPPPSRSGAPPQPPATLRPSRRRTRPP
RPADRRDAPADCAYLWRILTPRRGRARRSDVGARHRACGRRDVLLSRQGPANPEGARR
VVGGQERVWPAVRRGRGGSMFRLLSWSLGRGFLRAAGRRCRGCSARLLPGLAGGPGPE
VQVPPSRVAPHGRGPGLLPLLAALAWFSRPAAAEEEEQQGADGAAAEDGADEAEAEII
QLLKRAKLSIMKDEPEEAELILHDALRLAYQTDNKKAITYTYDLMANLAFIRGQLENA
EQLFKATMSYLLGGGMKQEDNAIIEISLKLASIYAAQNRQEFAVAGYEFCISTLEEKI
EREKELAEDIMSVEEKANTHLLLGMCLDACARYLLFSKQPSQAQRMYEKALQISEEIQ
GERHPQTIVLMSDLATTLDAQGRFDEAYIYMQRASDLARQINHPELHMVLSNLAAVLM
HRERYTQAKEIYQEALKQAKLKKDEISVQHIREELAELSKKSRPLTNSVKL"
BASE COUNT 714 a 646 c 728 g 696 t
ORIGIN
1 gatgccccgc ccgcgcccat ggcgcagcca cacacgacct cggtcccgta cttcgcgcgc
61 tctcctgcac cgccgccgcc atctcgctca ggagctcctc cacaaccgcc ggcaacacta
121 cggccatcgc gccgcaggac acgccctcca cgaccggcgg accgccgcga cgctccagct
181 gactgcgcct acctgtggag gatcctgacc ccccgccggg gcagggcgag acggagtgac
241 gtcggggcgc gtcatcgcgc gtgcggacgc agggatgtcc tgctcagtcg tcagggcccg
301 gccaatccgg agggcgctcg gcgcgtggtc gggggccagg agcgcgtctg gcctgcagtg
361 cgcagaggac gcggcgggag catgttccgg ctcctgagct ggagcctggg ccgaggcttc
421 ctgcgggccg cggggcggcg gtgccggggc tgctccgcgc gcctgctccc ggggctggca
481 ggaggtccgg ggcccgaggt gcaggtgccg ccatcccgag tcgcgccgca cggccggggc
541 ccaggcctgc tgccgctgct ggcagcgctc gcctggttct cgaggcccgc tgcggcagag
601 gaggaggagc agcagggagc cgacggggcc gctgccgagg acggggcgga cgaggccgag
661 gcagagatca tccagctgct gaagcgagcc aagttgagca ttatgaaaga tgagccagaa
721 gaggctgagt taattttgca tgacgctctt cgtctcgcct atcagactga taacaagaag
781 gccatcactt acacttatga tttgatggcc aacttagcat ttatacgggg tcagcttgaa
841 aatgctgaac aactttttaa agcgacaatg agttacctcc ttggaggggg catgaagcag
901 gaggacaatg caataattga aatttcccta aagctggcca gtatctatgc tgcgcagaac
961 agacaggaat ttgctgttgc tggctatgaa ttctgcattt caactctaga ggaaaaaatt
1021 gaaagagaaa aggaattagc agaagacatt atgtcagtgg aagagaaagc caatacccac
1081 ctcctcttgg gcatgtgctt agacgcctgt gctcgctacc ttctgttctc caagcagccg
1141 tcacaggcac aaaggatgta tgaaaaagct ctgcagattt ctgaagaaat acaaggagaa
1201 agacacccac agaccattgt gctgatgagt gacctggcta ctaccctgga tgcacagggc
1261 cgctttgatg aggcctatat ttatatgcaa agggcatcag atctggcaag acagataaat
1321 catcctgagc tacacatggt actcagtaat ctagctgcag ttttgatgca cagagaacga
1381 tatacacaag caaaagagat ctaccaggaa gcactgaagc aagcaaagct gaaaaaagat
1441 gaaatttctg tacaacacat cagggaagag ttggctgagc tgtcaaagaa aagtagacct
1501 ttgacaaatt ctgtcaagct ctaaatccat ttttgtgtag ggagaataat gtctagtaat
1561 gtggaagaat agctatcatt cctgtctctg tggcacccga tcaatggctt aaatctgtcg
1621 tttttgatat tcaggtttcc tcaatttagc cttagtgaag gaggggttgt acacactgcc
1681 atttttgtat tttaaaggaa aaatgacttt cattcccaac tgattatgac ctttcaggat
1741 gtcgtcaagt gatgctttca gttgtaacac gtgacttggt gctgtccctg ctggtctaag
1801 tagaactgta gattcatatg ggctggtgtt cctgtgcgct gtgggtgtgg tgattcagcc
1861 tggcatttct accataagtt tttggtctgc tgatttgctg ccctgtcttc tcttacttta
1921 ctttatcaat acctggcaaa ctgaccagaa ttaccttcct catggcaaag ggggattatg
1981 gtgaattgtt gttcttatag tctgtttcat gaagcacaag tggaatttaa tacataaaag
2041 agaaaaatat cttagtttgc taccagcatc cagcatgaag ttgtaaagtg gggattaggc
2101 acgtgacagt atagcaccca tttgaattta aataaaagtg aaccatattt atctggttat
2161 ataaaactaa aaatgggggt gtttatataa aactaaaaac taagaatgat gtaacctttt
2221 gtctgtgtta tctgaacact ctacttcctt tgcagcctta gtcacacaac tgagtcatct
2281 caagtactct ttaaggacac acagcccagg ctgttctgag tcagaatagg cccctacagg
2341 tatattttaa aactcttcgt aattctaatg tgtactgctg gtatagctga actactgacc
2401 tggatcttag tcctagcctt tttgcttttg caatttcagt atcttcatct ctaaactagg
2461 gaaacactgg gattctttct tagctgtggg ggaaggtatt tggttagatg actttgaatg
2521 aatagactgc tgtgctgaaa gagctttatc acactgtctc aaagtatgta aagatacata
2581 ggtggatgct cttactgcag cagtcatgaa tacattttta gccatttacc taaggaaaaa
2641 gacagttttt ctaggtacca tgaaggaaga ttgaccctgt tggtatgcct gtgggggtgg
2701 gatgtgagtg ggactgataa actgatactt ttggttcgta tgtacatact ggaagaatct
2761 tcataataaa tgagactaca caac
//