LOCUS AK056833 2649 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ32271 fis, clone PROST1000536, weakly similar
to Homo sapiens contactin associated protein (Caspr) mRNA.
ACCESSION AK056833
VERSION AK056833.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2649)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2649
/clone="PROST1000536"
/clone_lib="PROST1"
/db_xref="H-InvDB:HIT000013447"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="prostate"
CDS 240..2477
/codon_start=1
/protein_id="BAB71293.1"
/translation="MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSF
SSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGS
SDWVTSYLLMFSDGGRNWKQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPL
AWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSN
GILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVL
IELLDTQVNFTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLE
NLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKV
SVTFQFRTWNRAGHLLFGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGLND
GQWHSVSFSAKWSHMNVVVDDDTAVQPLVAVLIDSGDTYYFGGCLDNSSGSGCKSPLG
GFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLPSYCEHGGECSQSW
DTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSGPLGPFLVYCNM
TDAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFAYAAGAGQLRSAVNLAERCEQRLALR
CGTARRPDSRGGTPLSWWVGRTNETHTYWGVSLPDAQKCTCGLEGNCIDSQYYCNCDA
GRNEW"
BASE COUNT 622 a 651 c 760 g 616 t
ORIGIN
1 agaaagctgc ggcgcgagtc cgcggggccg acctcggaga cgcagctggg gccgggcgcg
61 gcttggcggg aaggtctgca gcgccgaggg aggctgctag tgcgtgagga agagagctag
121 agactggaca cgggagacag agcagcgtca gagccgcgca ggggacggga gtgagagcag
181 gagcgacgca gagcggccgt cgccgtgccc gggtctcagg gcgcctggct gaagtgagca
241 tggcttcagt ggcctgggcc gtcctcaagg tgctgctgct tctccccact cagacttgga
301 gccccgtggg agcaggaaat ccacctgact gtgatgcccc actggcctct gccttgccta
361 ggtcatcctt cagcagctcc tcagagctgt ccagcagcca cggcccgggg ttttcaaggc
421 ttaatcgaag agatggagct ggtggctgga ctccacttgt gtcaaataaa taccaatggc
481 tgcaaattga ccttggagag agaatggagg tcactgctgt cgccacccaa ggaggatatg
541 ggagctctga ctgggtgacc agctacctcc tgatgttcag tgatggtggg agaaactgga
601 agcagtatcg ccgagaagaa agcatctggg gttttccagg aaacacaaac gcagacagtg
661 tggtgcacta cagactccag cctccctttg aagccaggtt cctgcgcttt ctccctttag
721 cctggaaccc taggggcagg attgggatgc ggatcgaagt gtacggatgt gcatataaat
781 ctgaggtggt ttattttgat ggacaaagtg ctctgctgta tagacttgat aaaaaacctt
841 taaaaccaat aagagacgtt atttctttga aatttaaagc catgcagagc aatggaattc
901 tacttcacag agaaggacaa catggaaatc acattactct ggaattaatt aaaggaaagc
961 ttgtcttttt tcttaattca ggcaatgcta agctgccttc cactattgct cctgtgaccc
1021 tcaccctggg cagcctgctg gacgaccagc actggcattc cgtcctcatc gagctcctcg
1081 acacgcaggt caacttcacc gtggacaaac acactcatca tttccaagca aagggagatt
1141 ccagttactt ggatcttaat tttgagatca gctttggggg aattccgaca cccggaagat
1201 cgcgggcatt cagacgtaaa agctttcatg ggtgtttaga aaatctttat tataatggag
1261 tggatgttac cgaattagcc aagaaacaca aaccacagat cctcatgatg ggaaatgtgt
1321 ccttctcatg tccacagcca cagactgtcc ctgtgacttt tctgagctcc aggagttatc
1381 tggctctgcc aggcaactct ggggaggaca aagtgtctgt cacttttcaa tttcgaacgt
1441 ggaacagagc aggacatttg cttttcggcg aacttcgacg tggttcaggg agtttcgtcc
1501 tctttcttaa ggatggcaag ctcaaactga gtctcttcca gccgggacag tcaccaagga
1561 atgtcacagc aggtgctgga ttaaacgatg ggcagtggca ctctgtgtcc ttctctgcca
1621 agtggagcca tatgaatgtg gtggtggacg atgacacagc tgttcagccc ctggtggctg
1681 tgctcattga ttcaggtgac acctattatt ttggaggctg cctggacaac agctctggct
1741 ctggatgtaa aagccccctg ggagggtttc agggctgcct aaggctcatc accattggtg
1801 acaaagcggt ggatcccatc ttagtacagc agggggcgct ggggagtttc agggacctcc
1861 agatagactc ctgcggcatc acagacaggt gcttgcccag ctactgtgag catgggggcg
1921 agtgttccca gtcgtgggac accttctcct gtgactgtct aggcacaggc tatacgggcg
1981 agacctgcca ttcctctctc tacgagcagt cttgtgaagc ccacaagcac cgagggaacc
2041 cgtctgggct ttactatatt gatgcagatg gaagtggccc cctgggacca tttcttgtgt
2101 actgcaatat gacagacgcc gcgtggacgg tggtgcagca cggtggcccc gacgcggtga
2161 ccctccgagg tgcccccagc gggcacccgc gctcggctgt gtccttcgcg tacgcagcgg
2221 gcgcggggca gctgcggtcc gcggtgaacc tggcggagcg ctgcgagcag cggctggctc
2281 tgcgctgcgg gacggcgcgg cgcccggact cacgaggtgg aaccccactg agctggtggg
2341 ttggaagaac caatgaaaca cacacctact ggggagtttc tctgcctgat gctcaaaagt
2401 gtacttgtgg attagagggg aactgcattg attctcagta ttactgcaac tgtgatgctg
2461 gccggaatga atggtgattt ccacatgatt tccctgcaca aaaatgtggt ttttattctt
2521 taattatgca tagttaatta aatgtcagac aagctggtac aataaggtaa ctaaagtatg
2581 ttcaagcaag ctgaaataca agttttgatg aaatatgatc agttaatcta aggattaaat
2641 tttatgacc
//