LOCUS AK056761 2648 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32199 fis, clone PLACE6002710, highly similar
to Homo sapiens pentatricopeptide repeat domain 2 (PTCD2), mRNA.
ACCESSION AK056761
VERSION AK056761.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2648)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2648
/clone="PLACE6002710"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000013375"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 1137..1847
/codon_start=1
/note="highly similar to Homo sapiens pentatricopeptide
repeat domain 2 (PTCD2), mRNA"
/protein_id="BAG51808.1"
/translation="MKDQHLRGFFSDSTSFNILMDMLFIKGKYKSALQVLIEMKNQDV
KFTKDTYVLAFAICYKLNSPESFKICTTLREEALLKGEILSRRASCFAVALALNQNEM
AKAVSIFSQIMNPESIACINLNIIIHIQSNMLENLIKTLKNAAEGNLSKFVKRHVFSE
EVLAKVREKVKDVPALVAKFDEIYGTLHITGQVTTDSLDAVLCHTPRDRKSHTLLLNK
RMVSRRTFQPLSQSLLAE"
BASE COUNT 700 a 576 c 622 g 750 t
ORIGIN
1 agtagttggt atggtccgag acagtatggc tgctgcattt cggccctcga atcgagttct
61 cctgcaggcg ctgcagattt tggtgtatcc tggggtggga ggctccggct ctgtcagctg
121 ccgctgccct ctcggaggta tccgcggctt tagcctaggg aaggagggga gggatgggag
181 agaagggagt gttagatccc agctagcatc tctgtggagc agccacagct cctaagtcac
241 tcactggcct ggagcgcacc ctcgccctct agttgcacgt gggtgcagtg gtgaccactg
301 ggggtcgtgg atacccccag tgcctgcaaa tcgaaggact gctggggtat tgaccttggg
361 gctgtagtgc tccctcagat ggggcgacgt tcgtcttcag gaacatccct cccgccttgg
421 gtgactttta tttatttatt tatttatttt tgagacgaag tcttgctctg tcgcccaagc
481 tggagtgcgg tggcgcgatc tcggctcact gcagcctccg cctcccgggt tcaagcgatt
541 ctcctgcctc agctttccga gtagttggga ctacaggcgt gcgccaccac gcccgggtaa
601 ttttttgtat ttttagtaga gacgggtttc actatgttgg ccaggctggt ttcgaactcc
661 tgacctcgtg gtccacccgc ctcggcctcc caaagtgctg ggattatagg agtgagccac
721 cgcgcccggc ctttttcttt tctgcagagt ttggaagcag aggtcttatg gagtctcagt
781 tctgctaaca atctaaaaga cttaacgcta aaagatacct acttacagat aatgtggtga
841 aattaaaaga atttcaacaa aagaaagtgg ctgttgcatg taatctttct ggcactaaag
901 aaacgtattt tagaaacttg aaaaagaaac tgacccagaa caagctcatc ttgaaggggg
961 agttgataac cttactacat ttgtgtgagt ctcgggacca tgtggaactg gctaaaaatg
1021 tcatttacag gtaccatgca gagaacaaaa atttcacttt gggggagtat aaatttggac
1081 cgctttttgt gaggttgtgt tacgagttgg atctcgagga atctgcagtg gagctcatga
1141 aagaccagca tttacgaggt ttcttctcag actccacatc attcaatatt ttgatggata
1201 tgttatttat caaaggcaaa tataaaagtg ctttgcaagt attgatagag atgaaaaacc
1261 aagatgtgaa gttcaccaaa gatacctatg ttcttgcttt tgcaatttgc tacaaactga
1321 atagccctga gtctttcaaa atctgtacta cattaagaga agaagctcta ctcaaaggag
1381 aaattctctc caggagagca tcctgtttcg ctgtggcatt agctctgaat cagaatgaga
1441 tggcaaaagc tgtgtccatt ttttctcaaa tcatgaatcc agaaagcata gcctgcatta
1501 atttaaatat tataatccat atccagtcaa atatgttgga aaacctgata aagactctaa
1561 aaaatgctgc agaaggaaat ttatcaaaat ttgtgaaaag acatgtgttc tcggaggaag
1621 tgctggccaa agtgagggaa aaagtgaagg atgtgcctgc ccttgtggcc aaatttgatg
1681 agatctatgg gacactgcac atcactggcc aggtcaccac tgattctttg gatgctgtgc
1741 tctgccacac ccccagggac aggaaatctc acacgttgct attaaacaag aggatggtca
1801 gccgtcgcac cttccagcca ctcagccagt ccctgttggc tgagtaaccc tggtttcagt
1861 ccacctatgg atctgagggg cctgcttcta gtgagttatt acctttccta agaagccagg
1921 tatcgcactt cagcagacag tgtgctgaca cttggtcttc tcctgaaatt cccaaattca
1981 ctgaatggta ccatgccgat ctctgagaag ttatgttgca ccactgtgaa ggtctagatg
2041 caagcttggc tccctcagaa aggcgcttcc cttttgcatg gctgaggatc cttgaaggaa
2101 cctggtcagt ctccggttca gcttccgaca ccagagtgga acccagtaag caccatcagg
2161 aatgaatttc actacaagtg tggataactc tgattttcaa aggagtagtt acttgcaaat
2221 tacatccttg ctgaattcag gaggtatgaa accctatttt accatgttag aaaacagccc
2281 aggattttct cattgctctg ccatcatata tgtctatgac ttgagccctt atttttccat
2341 ctgcaaaaca ataatgccta tgtgtctttg catatagatt tgaaatcttc attcaaggtt
2401 tagtaggatc atattttctc aaaaataaga gaaataaggt tcataaggaa acttgctggg
2461 attgtggttg ttttgttttc tcagcagcac aaacaaaacc agaatttagc ctttaggact
2521 gctgagtaag ccaaatttaa atgactactg ctttgttcat gggtaagcca tgtgcttttc
2581 aaaataagtg ccactaaaaa ccacataatg ctttggtttc tatgtggata ataaatattt
2641 agtcctat
//