LOCUS AK056760 1258 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32198 fis, clone PLACE6002699, highly similar
to Homo sapiens uroplakin 3B (UPK3B), transcript variant 3, mRNA.
ACCESSION AK056760
VERSION AK056760.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1258)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ishibashi,T., Kanehori,K., Yosida,M., Watanabe,S., Ishida,S.,
Ono,Y., Hotuta,T., Hiraoka,S., Murakawa,K., Takiguchi,S.,
Kusano,J., Watanabe,M., Fujimori,K., Tanai,H., Ishida,M.,
Yamashita,H., Chiba,Y., Sugiyama,T., Irie,R., Otsuki,T., Sato,H.,
Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y.,
Saito,K., Nishikawa,T., Kimura,K., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Kanda,K., Wagatsuma,M., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..1258
/clone="PLACE6002699"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000013374"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 39..836
/codon_start=1
/note="highly similar to Homo sapiens uroplakin 3B
(UPK3B), transcript variant 3, mRNA"
/protein_id="BAG51807.1"
/translation="MGLPWGQPHLGLQMLLLALNCLRPSLSLELVPYTPQITAWDLEG
KVTATTFSLEQPRCVFDGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDG
HYMTLPLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYREDPRIH
RHLARAAKWQHDRHYLHPLFSGRPPTLGLLGSLYHALLQPVVAGGGPGAAADRLLHGQ
ALHDPPHPTQRGRHTAGGLQAWPGPPPQPQPLAWPLCMGLGEMGRRE"
BASE COUNT 195 a 460 c 342 g 261 t
ORIGIN
1 agaccagccc ctgagcctcc cgggtgctgg cagctgtcat ggggctaccc tgggggcagc
61 ctcacctagg gctgcagatg ctcctcctgg cgttgaactg tctccggccc agcctgagcc
121 tggagctggt gccctacaca ccacagataa cagcttggga cctggaaggg aaggtcacag
181 ccaccacctt ctccctggag cagccgcgct gtgtcttcga tgggcttgcc agcgccagcg
241 ataccgtctg gctcgtggtg gccttcagca atgcctccag gggcttccag aacccggaga
301 cactggctga cattccggcc tccccacagc tgctgaccga tggccactac atgacgctgc
361 ccctgtctcc ggaccagctg ccctgtggcg accccatggc gggcagcgga ggcgcccccg
421 tgctgcgggt gggccatgac cacggctgcc accagcagcc cttctgcaac gcgcccctcc
481 ctggccctgg accctatcgg gaagaccccc ggatccatcg acacctggcc agggcggcga
541 agtggcagca tgatcgtcat tacctccatc ctctcttctc tggccggcct cctacccttg
601 gccttcttgg cagcctctac catgcgcttc tccagcctgt ggtggccgga ggaggccccg
661 gagcagctgc ggatcggctc cttcatgggc aagcgctaca tgacccacca catcccaccc
721 agcgaggccg ccacactgcc ggtgggctgc aagcctggcc tggaccccct ccccagcctc
781 agcccctagc ctggcctctt tgcatggggc tgggggagat ggggcgccgg gagtgagtgc
841 atggtgcttt gtcccagctc ctgcacccac aggccccctc agggctcctt gcctttcccc
901 cccaccagca caccccgtac cctgcctgga atcccagcac cagcccccct gcctctcctc
961 tgcctttctg gtttctctcc ctctccaagc atctgcaagt tgcactcagg agggtttagg
1021 ggagggccat gggcaggctg gtctcgtgat agtgagtgag tgctcatggg atctggttgt
1081 ttagaagcat gcagcacctc ctgcttcact ctctctgtct ctcctgctcc accatggcca
1141 gaaacgtacc tgcttcccct tcgccttctg ccgtgattgt cagtttcttg agggctcccc
1201 agccatgctt cctgtacagc ctgcaaaact gtgagtcaat taaacctctt ttcttcat
//