LOCUS AK056711 3830 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32149 fis, clone PLACE5000159, highly similar
to Pogo transposable element with KRAB domain.
ACCESSION AK056711
VERSION AK056711.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3830)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3830
/clone="PLACE5000159"
/clone_lib="PLACE5"
/db_xref="H-InvDB:HIT000013325"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 102..1931
/codon_start=1
/note="highly similar to Pogo transposable element with
KRAB domain"
/protein_id="BAG51796.1"
/translation="MESTAYPLNLSLKEEEEEEEIQSRELEDGPADMQKVRICSEGGW
VPALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEGE
EESQNSDEWQLQGGTSAENEESDVKPPDWPNPMNATSQFPQPQHFDSFGLRLPRDITE
LPEWSEGYPFYMAMGFPGYDLSADDIAGKFQFSRGMRRSYDAGFKLMVVEYAESTNNC
QAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAK
GDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYDLSLRHKVPVPQHLPED
LTEKLVTYQRSVLALRRAHDYEVAQMGNADETPICLEVPSRVTVDNQGEKPVLVKTPG
REKLKITAMLGVLADGRKLPPYIILRGTYIPPGKFPSGMEIRCHRYGWMTEDLMQDWL
EVVWRRRTGAVPKQRGMLILNGFRGHATDSVKNSMESMNTDMVIIPGGLTSQLQVLDV
VVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLGLFLEWVMVAWNSISSESIVQG
FKKCHISSNLEEEDDVLWEIESELPGGGEPPKDCDTESMAESN"
BASE COUNT 1025 a 897 c 954 g 954 t
ORIGIN
1 gcgcgcacgg gaggacggag aggcggaaag gatggcgctg tgacagccgg gccggagccc
61 tcgcgtcccc accccgcgcc ctggccgctg ggcccggcga gatggagtcc acagcctacc
121 ctctcaattt gagcctgaaa gaagaggaag aggaagaaga gattcagagc cgggaactag
181 aggacggccc ggcagacatg cagaaagtac gaatctgctc tgagggcgga tgggtaccgg
241 ccctatttga tgaggtggcc atatattttt ccgatgagga atgggaagtt ttgacggagc
301 aacaaaaggc cctctaccgg gaagtcatga ggatgaatta tgaaactgtc ctgtccctgg
361 aattcccatt ccctaagcca gacatgatca cccgtttgga aggggaggag gagtctcaga
421 attctgacga gtggcagctc caaggaggca cctctgcaga aaatgaagaa tctgacgtaa
481 agcctccaga ctggccaaac ccaatgaatg ctacctccca gtttcctcag cctcagcact
541 ttgacagctt tggcctccgt ctgcctcggg atatcacaga gctgcccgag tggagtgagg
601 ggtacccctt ctacatggcc atgggcttcc cagggtatga cctctcggct gatgacatag
661 ctgggaagtt tcagttcagc cggggcatgc gccgcagtta cgacgcaggg ttcaagctga
721 tggtagtgga atatgctgag agtaccaaca actgccaggc tgccaagcag tttggagtat
781 tggaaaaaaa cgttcgagac tggcgcaaag tgaagccaca gcttcaaaac gcccacgcca
841 tgcggcgggc gttccgaggc cccaagaatg ggaggtttgc tctggtggac cagcgtgtgg
901 ccgaatatgt cagatacatg caggccaaag gggaccccat cacccgggag gcgatgcagc
961 tgaaagctct cgaaatcgcc caggaaatga acattccaga gaaagggttc aaggcaagct
1021 tgggttggtg tcgaagaatg atgagaaggt atgacctgtc tctgaggcat aaagtgcccg
1081 tgccccagca cctgccggaa gacctgactg agaaactcgt cacttaccag cgcagtgtcc
1141 tggctctgcg cagggcgcat gactatgagg tagctcagat ggggaatgca gatgagacgc
1201 ccatttgttt agaggtgcca tcacgggtaa ctgttgataa ccagggcgaa aagcctgtct
1261 tggtcaagac accaggcagg gaaaaactga aaatcacagc aatgcttggt gtcttggctg
1321 atgggaggaa gttaccaccg tacatcattt tgaggggaac atatatcccc ccggggaagt
1381 ttcccagtgg gatggaaatt cgctgccacc ggtatgggtg gatgactgaa gacttgatgc
1441 aggactggtt ggaagtggtg tggagacgga ggacaggagc agtgcccaag cagcgaggga
1501 tgctgatctt gaatggcttc cggggccatg ccacagattc cgtgaagaac tccatggaaa
1561 gcatgaacac tgacatggtg atcatcccag ggggtctgac ctcacagctt caggtgctgg
1621 atgtcgtggt ctacaagcca ctgaatgaca gtgtgcgggc ccagtactcc aactggcttc
1681 tggctgggaa cctggcgctg agcccaaccg ggaatgctaa gaagccaccc ctgggcctct
1741 ttctggagtg ggtcatggtc gcgtggaata gcatctcaag tgagtccatc gtccaagggt
1801 tcaagaagtg ccatatctcc agcaacttgg aggaggaaga cgatgtcctg tgggaaatcg
1861 agagtgagtt gccaggagga ggagaaccac caaaagattg tgacaccgaa agcatggctg
1921 agagcaactg aagggaaagg gaaagcaaat ggaactctga tttaaacagc tggggatgaa
1981 attcctcaag atgattattc ctgaaagtgt ggatgcgctg gatgcgcagg gaacatcagg
2041 aaaaggccac ggggctctga acagccccgg tccagacagc agcctgtaca tccatcccag
2101 gacacagccc agcccctccc cacaccatac aaggtatcag aaaagtctag gacctatcat
2161 ttcatcagag acatgatcag aaaagaaact gcttctgccc catttcttgt tttggagatt
2221 actccatctg tccatcaaaa gaaacctgta aatatgaaag aacaaaggtt atttcctgga
2281 gaaaagacaa tttattcaac accaacaagg gactcatcat atgggcacaa ctctggtgtc
2341 cttctatgga gaaaacctca agtaaagttt tattctgcct ttgaaaatgc ttccaaaagt
2401 agaccctgtc cccacacagg tcaagactac agagaaggct ttgtagaaat gtgtcaccta
2461 tgtacacctg ctacttacac atttcctctt ttggaaaaat gagatactta gaataacaag
2521 aaaattaaga catactggcc tggtgccagc agatggcttt tctatagaca aactaggtta
2581 gtgtggaaga tataggttaa aataaactat gctgttttat ttatcttccc aacctgattg
2641 gcagctagac ttttttaggg tctcatttaa tggccctgtt tttttcattg ttatatttaa
2701 tgatagggca ggatttcgta tgcaagctct tgtttctcag gctgcctgca gaagaagtcg
2761 ctataaatta tctgttgtct acatggtaca aggcccattg actcatctga tgcttgtttt
2821 gttaatttct ttaatatttt tatcacgggg cagtgggagg gcttgggctt ttagccacag
2881 ctgttttaag acttctgatc tcctgccctg caggaatagg tgggaagtca ttgaattttt
2941 acactatagt aatttgcatt cccacataag tttgagtgtt acgaaaacat tcctttaaag
3001 ggatctgtgc tacacaaaat atgccaggac ctcacagaca aagccattgc tagaaatgtc
3061 attccaatga tcagatctgg aaacaggctg ccataaccac ttttccttct tgtagactca
3121 gctcacctgt atatttaaac tgttcttggc atcttgaaac acctatttct actcaggtac
3181 tcattgtcct gttactgatt cacctttctg atccttttca accagttttc ccccaagggg
3241 ggaaatttta cttaacctct agtatttgaa caactcaata tttgaattgt tgccccattt
3301 gcttttacct gtactgtatt cttggtcatc tcaaatggcg tctaaaccca gctactttgc
3361 attccagaag tttccattcc ctccaattcc acctaatttt tcatctgtcc tagttactgg
3421 ctctttcttc atgtcttatt tctcttgctt tgggagctta aaagatttta caagacctaa
3481 ttttgggttc cttccttgga gccatagtta ccctgccaag aagagtagaa aatgggttca
3541 actcctgttt cgctccacca acacctctgt gagtctcatc atcagctgag cgatgatgcc
3601 ttacaggttg catagcactg gaactttcct agagtaacgg ctctgctgcc agggtttctc
3661 tgggctcatt cttccactga cttaattatg atctatgcct aacagagccc cagtacaact
3721 attttgcaga atggctgtta ccctagaatt actatagcac atattgagat atagttgtac
3781 tccctagtag ataggaactg accccaacaa taaactttga taataaagac
//