LOCUS AK056656 3599 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32094 fis, clone OCBBF2000986, highly similar
to Homo sapiens elongation factor Tu GTP binding domain containing
1, transcript variant 1, mRNA.
ACCESSION AK056656
VERSION AK056656.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3599)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Ota,T., Wakamatsu,A.,
Ishii,S., Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K.,
Nishikawa,T., Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y.,
Sekine,M., Kikuchi,H., Murakawa,K., Kanehori,K.,
Takahashi-Fujii,A., Oshima,A., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3599
/clone="OCBBF2000986"
/clone_lib="OCBBF2"
/db_xref="H-InvDB:HIT000013270"
/db_xref="taxon:9606"
/dev_stage="fetus"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 889..3462
/codon_start=1
/note="highly similar to Homo sapiens elongation factor
Tu GTP binding domain containing 1, transcript variant 1,
mRNA"
/protein_id="BAG51777.1"
/translation="MKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILENIWSLYDA
VLKKDKDKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPS
PLDITAERVERLMCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAVDAK
ALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGDEPR
GDEQQVESMTPKPVLQEENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVP
LGFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSAT
LCSLPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETG
EHVLVTAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQ
KVAVIHQMKEDQSKIPEGIQVYSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSD
LIRSMEQLTSSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPR
KCGPNILVNKSEDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPL
MGVCFVLEKWDLSKFEEQGASDLAKEGQEENETCSGGNENQELQDGCSEAFEKRTSQK
GESPLTDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYACDIMATGDVLGRVYAVL
SKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIP
SDPFWVPTTEEEYLHFGEKADSENQARKYMNAIRKRKGLYVEEKIVEHAEKQRTLSKN
K"
BASE COUNT 1126 a 739 c 862 g 872 t
ORIGIN
1 agagctctcg gactttcgga agctctcggt gtgggtgcga cccgagagaa ggagcggggc
61 tggtggggct gctgcagccg tcacaggaaa taagtaatca tggtgctcaa cagtttggat
121 aagatgattc aactccagaa aaacactgcc aacatcagga atatttgtgt tttggctcat
181 gttgaccatg gaaaaactac tctggctgac tgtcttatat ctagcaatgg aatcatctcc
241 agccgcctag caggcaagtt aaggtacatg gacagcagag aagatgaaca gatccgaggg
301 atcactatga aatccagtgc catttcccta cattatgcaa caggtaatga ggagtacctg
361 atcaatctga tagactctcc aggacacgtg gacttttcct cagaagtatc aaccgctgtt
421 cgcatttgtg atggatgcat cattgtggta gatgctgtgg aaggagtctg tccacagaca
481 caggcagttc tgcgacaagc ttggcttgaa aacatccgtc cggttttagt gattaataag
541 attgatcgct tgatagtgga actgaaattc accccacaag aggcctattc tcacctcaag
601 aatattttag aacagattaa tgcgctcaca gggactcttt ttacttctaa agtcctagaa
661 gaaagagcag agagggagac tgaatcccaa gtgaatccaa attctgaaca aggagagcaa
721 gtatatgact ggagcactgg cttggaggac acagatgatt ctcaccttta cttctctcca
781 gaacagggga atgtggtgtt taccagtgca atagatgggt agggctttgg aattgagcac
841 ttcgccagaa tctacagtca aaaaattggc atcaaaaagg aagttcttat gaaaaccttg
901 tggggagatt actatataaa tatgaaggct aaaaagatca tgaagggtga tcaggccaaa
961 ggaaagaaac ctttatttgt acagttgatc ctggaaaata tatggagttt gtatgatgct
1021 gttttgaaaa aggacaaaga caaaattgat aaaatagtga cttctttagg attaaaaatt
1081 ggagcccggg aggcacgaca ttcagaccct aaagttcaga tcaacgccat ttgcagtcag
1141 tggctaccca tatcccatgc tgttcttgct atggtgtgtc agaaacttcc tagtcccctt
1201 gatattacag ctgagagagt ggagagactg atgtgcacag gatcacaaac ttttgactct
1261 tttccaccag aaactcaagc actgaaagca gcttttatga aatgtggaag tgaggacact
1321 gctccagtta ttatatttgt ttccaaaatg tttgcagttg atgctaaggc cttgcctcag
1381 aataagccaa ggcctctcac tcaagaagaa attgctcaga gacgtgagcg tgcaagacaa
1441 aggcatgcag agaagcttgc agcagcacag ggacaggcac ccttggagcc cacccaagat
1501 gggagtgcca ttgaaacatg tccaaaagga gacgagccaa gaggtgacga gcaacaggtg
1561 gaaagtatga cccctaaacc tgtgctccag gaagaaaaca accaagagtc ttttattgca
1621 tttgctcggg tgttcagtgg tgtggctcga agaggaaaga aaatttttgt cttggggccc
1681 aaatacagtc ctcttgagtt tttacgaagg gtaccattag gcttctcagc tccaccagat
1741 ggcctccccc aagtccccca catggcatac tgtgctctgg aaaacctgta tcttctgatg
1801 ggaagggaac tggaatatct agaggaggta cctccaggaa atgtgctagg aataggaggc
1861 cttcaagatt ttgtgctgaa atctgcaaca ctgtgtagcc tgccatcctg cccaccattt
1921 ataccactca acttcgaagc cactcctatt gtgagagttg ctgttgaacc aaaacatcca
1981 agtgaaatgc ctcagctcgt aaaaggaatg aaactgttaa accaggctga tccctgtgtc
2041 cagattttaa ttcaggaaac gggagagcac gttttagtca cagcaggaga agtccacctt
2101 cagcgatgcc tggatgactt aaaagaaagg tttgcaaaga ttcatatcag tgtatctgaa
2161 cctattattc cattcagaga aacaatcaca aaacccccaa aagttgacat ggtcaatgaa
2221 gaaataggca aacagcaaaa agttgcagtc atacaccaaa tgaaagaaga tcaaagcaaa
2281 atccctgaag gaatccaagt ttactctgac gggctaatca ccataacaac tcccaataaa
2341 cttgccacgc tcagtgttcg agccatgccc cttccagaag aagtcaccca gattctggaa
2401 gaaaatagtg atttgattcg ttctatggag cagttgacat cctctttgaa tgagggcgaa
2461 aatactcaca tgattcatca gaagacccaa gagaaaattt gggaattcaa aggaaaactg
2521 gagcaacacc taacagggag aagatggagg aacattgttg accaaatctg gtcatttggc
2581 ccaagaaaat gtgggcccaa catactagtc aataaaagtg aagattttca gaactcagta
2641 tggacaggtc cagctgacaa agcttcaaaa gaagccagta gataccgaga tttgggcaat
2701 agcattgtga gtggcttcca actagcaacc ctctctggcc ccatgtgtga ggagcctctc
2761 atgggtgtct gttttgttct ggaaaaatgg gacctaagta aatttgagga acaaggagca
2821 agtgatctgg caaaagaggg acaggaggaa aatgaaacct gttctggtgg aaatgaaaac
2881 caagagctac aagatggctg ctctgaggcc tttgagaaga ggacatcaca gaaaggagaa
2941 tctccactca ctgactgcta tggacctttc tcaggacagc taattgccac catgaaagaa
3001 gcatgtcgct atgcactgca agtgaaacct cagcgcctga tggcagctat gtacgcatgt
3061 gacatcatgg ccactggtga tgttctcggt cgagtctatg ctgtcttgtc aaagagagaa
3121 ggtcgggtac ttcaagaaga aatgaaagaa gggacagaca tgttcatcat caaggctgtg
3181 ctgcctgttg ctgaaagctt tggttttgct gatgaaatca ggaagaggac aagtggcctg
3241 gccagcccac aactagtatt cagccattgg gagatcattc ccagtgaccc cttctgggtg
3301 ccaactactg aggaggaata cttgcacttt ggggagaagg ctgactctga gaaccaagcc
3361 cggaagtaca tgaacgcaat acgaaagcgg aaggggcttt atgtggaaga aaagattgtg
3421 gagcatgcag aaaagcagag gacactcagc aaaaataagt agctacctac tactggtgga
3481 ttcttttcct tatagtgaat ttaaaagtat catcaagggt ttaatattgg gaaaatttct
3541 ttttgccaca ttatctctgt ttattcactt tcaataaagt tgatccatat aaatatttt
//