LOCUS AK056637 2704 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32075 fis, clone OCBBF1000146, highly similar
to Nuclear pore complex protein Nup93.
ACCESSION AK056637
VERSION AK056637.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2704)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Ota,T., Wakamatsu,A., Ishii,S., Yamamoto,J.,
Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K.,
Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H.,
Kanda,K., Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A.,
Kawakami,B., Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y.,
Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2704
/clone="OCBBF1000146"
/clone_lib="OCBBF1"
/db_xref="H-InvDB:HIT000013251"
/db_xref="taxon:9606"
/dev_stage="fetus"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 459..2549
/codon_start=1
/note="highly similar to Nuclear pore complex protein
Nup93"
/protein_id="BAG51770.1"
/translation="MAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWT
MVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQL
GGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRA
QHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDV
TDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQ
QPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSH
EPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSEL
VIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDL
AKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTF
YLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSE
VLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSG
DTNARLVQMEVLMN"
BASE COUNT 664 a 644 c 698 g 698 t
ORIGIN
1 gttactccca tcagtttgtg ctttcaagct gatggctgac ttctctgaat ttgtgtagcg
61 cacaacgaat ggtgatgctg tgctccgggg gctgcagtgc acccttttta aagggaccct
121 gcaatctcat tgtttaattt gactctttag tgcttcagtc acatcagcac ttgcagaggg
181 gttgttcttt tcctttttct tctttctctc tttttctctt ctctctgtcc ttctccccac
241 ccccatccct caattcaggc agtttggggt gggaaaaact tgagcactgg ttccgacaga
301 gctcatctca tataagaagg tttggaagag ctgcagtgat cgacagcatc gaccgttctg
361 taactcctta aatttaagag ctgcagggct tcctgaagaa tgagaaggac aatgccctgc
421 tgtctgccat cgaagagtcc cggaagagga ccttcggcat ggctgaggag taccatcggg
481 agtcaatgtt ggttgagtgg gagcaagtga aacagcgaat tctgcacaca ctgctggcat
541 caggagaaga cgcccttgac tttactcaag aaagcgagcc aagctacatc agtgatgtgg
601 gaccccctgg tcgaagctct ctggataaca tcgagatggc ctatgcgcgg caaatttata
661 tctataatga gaaaattgta aatggacacc tgcagcctaa cctggtggac ctttgtgctt
721 ccgtcgcaga gctcgatgat aagagcattt ccgacatgtg gaccatggta aaacaaatga
781 cagacgtgtt gttgacaccg gcaacggatg ccctgaagaa ccgcagcagc gtggaagtgc
841 gcatggagtt tgtcaggcag gccttggcgt accttgagca gagttataag aattacaccc
901 ttgtgactgt ctttggaaat ttgcatcagg cccagctggg cggggtgcct gggacttacc
961 aattggttcg aagtttcctg aacattaaac tgccagctcc cttgcctgga ctacaggatg
1021 gagaggtgga aggccatcct gtgtgggcgc taatttacta ctgcatgcgc tgtggagacc
1081 tgcttgccgc ttcacaggta gttaatcgag cccagcacca gctgggagag tttaaaacct
1141 ggttccagga gtacatgaac agcaaggaca gaagattgtc cccagctacg gaaaacaagc
1201 tccggctgca ttaccgtagg gccctcagga acaatacaga tccctacaag cgggccgtgt
1261 actgtatcat tggcagatgt gacgtcaccg acaaccagag tgaagtggcg gacaaaactg
1321 aggattacct gtggctgaag ttgaaccaag tgtgttttga cgacgatggc accagctccc
1381 cacaagacag gctcactctc tcacagttcc agaagcagtt gttggaagac tatggcgagt
1441 cccactttac ggtgaaccag caacccttcc tctacttcca agtcctgttc ctgacagcgc
1501 agtttgaagc agcagttgcc tttcttttcc gcatggagcg gctgcgctgc catgctgtcc
1561 atgtagcact ggtgctgttt gagctgaagc tgcttttaaa gtcctctgga cagagtgctc
1621 agctcctcag ccacgagcct ggtgaccctc cttgcttgcg gcggctgaac ttcgtgcggc
1681 tcctcatgct gtacacccgg aagtttgagt ccacggaccc aagggaggcc ctccagtact
1741 tctatttcct cagggatgag aaagatagtc aaggagaaaa catgtttctg cgctgtgtga
1801 gtgagcttgt gattgaaagc cgagagttcg atatgattct tgggaaacta gagaatgacg
1861 gaagtagaaa gcctggagtc atagataagt ttactagtga cacaaagcct attatcaaca
1921 aagttgcttc tgtggcagaa aataaaggac tgtttgaaga ggcagcaaag ctgtatgacc
1981 ttgccaagaa tgctgacaag gtactggagc tgatgaacaa actgctgagc cctgtcgtcc
2041 cccagatcag tgccccgcaa tccaacaagg agaggctgaa gaacatggca ctctccattg
2101 ccgaacggta tagggctcaa ggaataagcg caaataaatt tgtggactcc acgttctatc
2161 ttcttttgga cttgatcacc ttttttgacg agtatcatag tggtcatatt gatagagctt
2221 ttgatatcat tgagcgcttg aagctggtgc ccctgaatca ggaaagtgtg gaagagagag
2281 tggctgcctt cagaaatttc agtgatgaaa tcaggcacaa cctctcagaa gtgcttcttg
2341 ccaccatgaa catcttgttc acacagttta agaggctcaa ggggacaagt ccatcctcgt
2401 catccaggcc ccagcgagtc atcgaggacc gcgactctca actccgaagt caagcccgca
2461 ctctgattac ctttgctgga atgataccat accgaacgtc tggggacacc aatgcgaggc
2521 tggtgcagat ggaggtcctc atgaattaag tgccatgctt tgtgggagtc tgggtcggca
2581 cactgtcagt acatcaggca catgggccca ctaggctggg gtttctggtt ttgtttctgt
2641 tgtgttttgt tttggtttct gtattatgta tttttgtcaa cgccaataaa tttctttgat
2701 ttgt
//