LOCUS AK056571 3292 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ32009 fis, clone NT2RP7009498, weakly similar
to FIBULIN-1, ISOFORM A PRECURSOR.
ACCESSION AK056571
VERSION AK056571.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3292)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3292
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7009498"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013185"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 38..2905
/codon_start=1
/protein_id="BAB71219.1"
/translation="MWAGLLLRAACVALLLPGAPARGYTGRKPPGHFAAERRRLGPHV
CLSGFGSGCCPGWAPSMGGGHCTLPLCSFGCGSGICIAPNVCSCQDGEQGATCPETHG
PCGEYGCDLTCNHGGCQEVARVCPVGFSMTEAAVGIRCTDIDECVTSSCEGHCVNTEG
GFVCECGPGMQLSADRHSCQDTDECLGTPCQQRCKNSIGSYKCSCRTGFHLHGNRHSC
VDVNECRRPLERRVCHHSCHNTVGSFLCTCRPGFRLRADRVSCEAFPKAVLAPSAILQ
PRQHPSKMLLLLPEAGRPALSPGHSPPSGAPGPPAGVRTTRLPSPTPRLPTSSPSAPV
WLLSTLLATPVPTASLLGNLRPPSLLQGEVMGTPSSPRGPESPRLAAGPSPCWHLGAM
HESRSRWTEPGCSQCWCEDGKVTCEKVRCEAACSHPIPSRDGGCCPSCTGCFHSGVVR
AEGDVFSPPNENCTVCVCLAGNVSCISPECPSGPCQTPPQTDCCTCVPVRCYFHGRWY
ADGAVFSGGGDECTTCVCQNGEVECSFMPCPELACPREEWRLGPGQCCFTCQEPTPST
GCSLDDNGVEFPIGQIWSPGDPCELCICQADGSVSCKRTDCVDSCPHPIRIPGQCCPD
CSAGCTYTGRIFYNNETFPSVLDPCLSCICLLGSVACSPVDCPITCTYPFHPDGECCP
VCRDCNYEGRKVANGQVFTLDDEPCTRCTCQLGEVSCEKVPCQRACADPALLPGDCCS
SCPDSLSPLEEKQGLSPHGNVAFSKAGRSLHGDTEAPVNCSSCPGPPTASPSRPVLHL
LQLLLRTNLMKTQTLPTSPAGAHGPHSLALGLTATFPGEPGASPRLSPGPSTPPGAPT
LPLASPGAPQPPPVTPERSFSASGAQIVSRWPPLPGTLLTEASALSMMDPSPSKTPIT
LLGPRVLSPTTSRLSTALAATTHPGPQQPPVGASRGEESTM"
BASE COUNT 559 a 1075 c 967 g 691 t
ORIGIN
1 agccgagccc agcccggggg acccgccgcc gccggtcatg tgggccggac tgctccttcg
61 ggccgcctgt gtcgcgctcc tgctgccggg ggcaccagcc cgaggctaca ccgggaggaa
121 gccgcccggg cacttcgcgg ccgagagacg ccgactgggc ccccacgtct gcctctctgg
181 gtttgggagt ggctgctgcc ctggctgggc gccctctatg ggtggtgggc actgcaccct
241 gcccctctgc tccttcggct gtgggagtgg catctgcatc gctcccaatg tctgctcctg
301 ccaggatgga gagcaagggg ccacctgccc agaaacccat ggaccatgtg gggagtacgg
361 ctgtgacctt acctgcaacc atggaggctg tcaggaggtg gcccgagtgt gccccgtggg
421 cttctcgatg acggaggcag ctgttggcat caggtgtaca gacattgacg aatgtgtaac
481 ctcctcctgc gagggccact gtgtgaacac agaaggtggg tttgtgtgcg agtgtgggcc
541 gggcatgcag ctgtctgccg accgccacag ctgccaagac actgacgaat gcctagggac
601 tccctgtcag cagagatgta aaaacagcat tggcagctac aagtgttcct gtcgaactgg
661 cttccacctt catggcaacc ggcactcctg tgtagatgta aacgagtgtc ggaggccatt
721 ggagaggcga gtctgtcacc attcctgcca caacaccgtg ggcagcttcc tatgcacatg
781 ccgacctggc ttcaggctcc gagctgaccg cgtgtcctgt gaagctttcc cgaaagccgt
841 gctggcccca tctgccatcc tgcaaccccg gcaacacccg tccaagatgc ttctgttgct
901 tcctgaggcc ggccggcctg ccctgtcccc aggacatagc cctccttctg gggctccagg
961 gcccccagcc ggagtcagga ccacccgcct gccatctccc accccacgac tacccacatc
1021 ctccccttct gcccctgtgt ggctgctgtc caccctgctg gccaccccag tgcctactgc
1081 ctccctgctg gggaacctca gacccccctc actccttcag ggggaggtga tggggacccc
1141 ttcctcaccc aggggccctg agtccccccg actggcagca gggccctctc cctgctggca
1201 cctgggagcc atgcatgaat caaggagtcg ctggacagag cctgggtgtt cccagtgctg
1261 gtgcgaggac gggaaggtga cctgtgaaaa ggtgaggtgt gaagctgctt gttcccaccc
1321 aattccctcc agagatggtg ggtgctgccc atcgtgcaca ggctgttttc acagtggtgt
1381 cgtccgagct gaaggggatg tgttttcacc tcccaatgag aactgcaccg tctgtgtctg
1441 tctggctgga aacgtgtcct gcatctctcc tgagtgtcct tctggcccct gtcagacccc
1501 cccacagacg gattgctgta cttgtgttcc agtgagatgc tatttccacg gccggtggta
1561 cgcagacggg gctgtgttca gtgggggtgg tgacgagtgt accacctgtg tttgccagaa
1621 tggggaggtg gagtgctcct tcatgccctg ccctgagctg gcctgccccc gagaagagtg
1681 gcggctgggc cctgggcagt gttgcttcac ctgccaggag cccacaccct cgacaggctg
1741 ctctcttgac gacaacgggg ttgagtttcc gattggacag atctggtcgc ctggtgaccc
1801 ctgtgagtta tgcatctgcc aggcagatgg ctcggtgagc tgcaagagga cagactgtgt
1861 ggactcctgc cctcacccga tccggatccc tggacagtgc tgcccagact gttcagcagg
1921 ctgcacctac acaggcagaa tcttctataa caacgagacc ttcccgtctg tgctggaccc
1981 atgtctgagc tgcatctgcc tgctgggctc agtggcctgt tcccccgtgg actgccccat
2041 cacctgtacc taccctttcc accctgacgg ggagtgctgc cccgtgtgcc gagactgcaa
2101 ctacgaggga aggaaggtgg cgaatggcca ggtgttcacc ttggatgatg aaccctgcac
2161 ccggtgcacg tgccagctgg gagaggtgag ctgtgagaag gttccctgcc agcgggcctg
2221 tgccgaccct gccctgcttc ctggggactg ctgctcttcc tgtccagatt ccctgtctcc
2281 tctggaagaa aagcaggggc tctcccctca cggaaatgtg gcattcagca aagctggtcg
2341 gagcctgcat ggagacactg aggcccctgt caactgtagc tcctgtcctg ggcccccgac
2401 agcatcaccc tcgaggccgg tgcttcatct cctccagctc cttttaagaa cgaacttgat
2461 gaaaacacag actttaccta caagcccggc aggagctcat ggtccacact cactcgcttt
2521 ggggctgaca gccactttcc caggggagcc tggggcctcc cctcgactct caccagggcc
2581 ttcgacccct ccaggagccc ccactctacc tctagcttcc ccaggggctc ctcagccacc
2641 tcctgtgact ccagagcgct cgttctcagc ctctggggcc cagatagtgt ccaggtggcc
2701 tcctctgcct ggcaccctcc tgacggaagc ttcagcactt tccatgatgg accccagccc
2761 ctcgaagacc cccatcaccc tcctcgggcc tcgcgtgctt tctcccacca cctctagact
2821 ctccacagcc cttgcagcca ccacccaccc tggcccccag cagcccccag tgggggcttc
2881 tcggggggaa gagtccacca tgtaaggagg tcactgtgtc cgggagactc tggagagagg
2941 acctctgcca gtggcccagg gtgtgtgcag ggcagctcca aggatgaacc tggtggggat
3001 gcctgggctc cctcctgcag gggccctggt gaggatggaa gacccccaag gctggatgta
3061 accttgttcc caagaagtgt ttggaatgtg ctgtaagaat ggaggaagtc gtttccactg
3121 tcagcatcct ccctggaccg cgtggctggc tcatcttttg agaagggttg ggactgccaa
3181 gttctcctgg aggaagagtt gcgtccggct gggattccac tcactgggac tgtaccgcca
3241 ggtgtcatgc gtctctctga ggtttcctga ttaaaggttg tctcggtttc cc
//