LOCUS AK056570 4056 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32008 fis, clone NT2RP7009482, highly similar
to Zinc finger protein 317.
ACCESSION AK056570
VERSION AK056570.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4056)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..4056
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7009482"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013184"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 289..2076
/codon_start=1
/note="highly similar to Zinc finger protein 317"
/protein_id="BAG51752.1"
/translation="MAALSPTFATSTQDSTCLQDSEFPVSSKDHSCPQNLDLFVCSGL
EPHTPSVGSQESVTFQDVAVDFTEKEWPLLDSSQRKLYKDVMLENYSNLTSLGYQVGK
PSLISHLEQEEEPRTEERGAHQGACADWETPSKTKWSLLMEDIFGKETPSGVTMERAG
LGEKSTEYAHLFEVFGMDPHLTQPMGRHAGKRPYHRRDYGVAFKGRPHLTQHMSMYDG
RKMHECHQCQKAFTTSASLTRHRRIHTGEKPYECSDCGKAFNDPSALRSHARTHLKEK
PFDCSQCGNAFRTLSALKIHMRVHTGERPYKCDQCGKAYGRSCHLIAHKRTHTGERPY
ECHDCGKAFQHPSHLKEHVRNHTGEKPYACTQCDKAFRWKSNFNLHKKNHMVEKTYEC
KECGKSFGDLVSRRKHMRIHIVKKPVECRQCGKTFRNQSILKTHMNSHTGEKPYGCDL
CGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRRRHMSVHLVKKRVECRQCG
KAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGEKPYECLVCGKA
FSDHSSLRSHVKTHRGEKLFVSSVWKRLQ"
BASE COUNT 1078 a 1041 c 999 g 938 t
ORIGIN
1 agtgaagcgg aagccattac tctctggagt cgattgcccc gagacacatg ggccaaggag
61 gggtcagcgg cgaattcttt cggcctgttg gggacccctc gtgtccccac gccagactgg
121 acctcccgta tgaacttctc ttcgcatcgg cggcggcttc cgtcacctcc gctcccccga
181 tcctattccc agtcgtatgc cagcttggag agtcacgtga gagcaagaga gtagctttct
241 ggttgtcctg gtgccctgct caggcaaact gactgccatt ctctgaggat ggcagctctg
301 tcccccacat ttgccacgtc cacccaggat tccacctgtc tccaggactc agaatttcct
361 gtttcttcaa aagaccattc ctgtccccag aatttggacc tgttcgtgtg cagtggtctg
421 gagcctcaca cacccagtgt tggttcccag gaatcggtga ctttccaaga tgtcgctgtg
481 gactttaccg agaaggagtg gcccttgctg gattcttctc agagaaaact gtacaaagat
541 gtaatgctgg agaactacag caacctcact tcactggggt atcaggtcgg caaacccagc
601 ctcatctcac acttggagca ggaggaggag ccgaggacag aggagagggg cgctcaccag
661 ggcgcttgtg cagattggga gactccatct aaaaccaagt ggtcacttct tatggaagat
721 atttttggga aggaaacgcc cagtggtgtg acgatggaaa gagccggtct tggagagaag
781 tccactgaat acgctcactt gttcgaagtc tttggcatgg accctcatct cactcagcca
841 atgggaaggc acgctggcaa gaggccctat caccgccgcg actatggggt agcgttcaag
901 ggcaggccgc acctcactca gcacatgagc atgtacgacg ggagaaaaat gcatgaatgt
961 catcagtgcc aaaaagcctt caccacgagc gcgtccctca cacggcacag gagaatccac
1021 accggggaga agccttacga gtgcagcgac tgcgggaaag ccttcaacga cccttcagcc
1081 cttaggagcc acgcaagaac tcacctcaaa gagaagccct ttgactgcag tcagtgtgga
1141 aatgcattcc ggaccctctc ggccctgaaa atccacatgc gagttcacac tggcgagagg
1201 ccttacaagt gtgatcagtg cgggaaggct tacggccgga gctgccacct catcgcacac
1261 aagagaacgc acaccggaga gaggccctac gagtgtcacg actgtgggaa agctttccag
1321 cacccctccc acctcaaaga gcacgtgagg aatcacacgg gggagaagcc ctacgcgtgc
1381 acgcagtgcg acaaagcctt ccgctggaag tccaacttta atttgcacaa gaagaaccac
1441 atggtggaga agacctacga atgtaaagaa tgcgggaaat cctttggcga tctcgtgtcc
1501 cggaggaaac acatgaggat tcacatcgtc aagaaacccg tggaatgtcg gcagtgcggg
1561 aagaccttcc gaaaccagtc catccttaag actcacatga actctcacac tggagagaaa
1621 ccatacgggt gcgatctctg cgggaaagct ttcagcgcga gttcaaacct caccgcacac
1681 aggaagatac acacgcaaga gagacgctac gaatgcgccg cctgcgggaa agtcttcggt
1741 gactatttat cccggcggag gcacatgagc gttcaccttg taaagaaacg agttgagtgt
1801 aggcagtgtg gcaaggcctt caggaaccag tcaacgctga agacgcacat gcgaagccac
1861 acgggggaga aaccgtacga atgcgatcac tgtgggaagg ccttcagcat aggctccaac
1921 ctgaatgtgc acaggcggat ccacaccggg gagaagccct acgaatgcct tgtctgcggg
1981 aaagccttca gcgaccactc atccctcagg agccacgtga aaactcaccg gggagagaag
2041 ctctttgtgt catccgtgtg gaaaaggctc cagtgagcgc gcctgcttta gagacacagg
2101 atgattcaga ccggaaacag acctcgtggg tgtaagagga agcctctgtg agctcgcacc
2161 ttactgggtg caaaagaatc cacggaactt gggagaagtc cagttcctgt aaaaactggg
2221 aagacgaggc gttctcatcc cataggaggt ttgtgagaac tcacgccggg ggtgaaaatg
2281 tacgtctgta gcatggagaa gccttcaggg tacattcagc tcttaacaaa cacaggagga
2341 cttaatggca gcttggcatt taatgtcaaa atccaagccg tggcatttaa tgtcaaaatg
2401 acttcagacc acttctagcc ttctgggccc atgagtaata atgagcacac tagggagcat
2461 ctctgtaaac acagtggctg gggaaaccct tcctagtctc acttgattcc tcatgacgga
2521 aatcacacta aagagagaaa tcagtgaagt aaggaacgtg gaaggtcatg aatgggccgc
2581 aaaccacggc cagctgcttg tctttgtatg gcttgccagc taacaatagt ggttccatct
2641 ttaaggaaga agaatgtttg atggagaaaa tttgtggcca atgaagtctg aaatacttcc
2701 tgtcatctgc ccctttccag aaaaacttgg ccgacccttg gtctacagca cgggttctca
2761 gtcgggcgac gatttggctg tctaggcgtc atttggcaat gtctagagac atttttggta
2821 gttagaatgg ggggaagata ctcctgactt gtaataagaa gacatcagag atgctgctaa
2881 gtcggctcca gcacacagga gccccccaca acgaagagtt agtgccccca aacgtcactg
2941 ttgctgaggt tgaaaataat catgcagtca ttcctcaatt actgcctgca gcaattcctc
3001 catttttatg aatcttgtga gcacttacgc taggagaaat ttcttttaca aaacttttaa
3061 aatacaatta gtgctgataa ttcctatgtg gaaatgattc cagccatggt cccctcactt
3121 gagcatgtga atattctcac ggagagaagc cccagcgaga ttttccggtg aatacgggat
3181 tgcacttact ctttcatcac ggaaacagac cccccgagag aagccccaac gagattttcc
3241 ggtgaatacg ggactgcacg tactctctca tcatgaaaac agagccccgt tcataaattt
3301 ttcatcttta tttttaaggt tatactcctc taaataaccc ttaagcctca tcaagaaagg
3361 tttgtttata gtatttttac tatagcttca tccttgataa cgtcctaatt tccttctgga
3421 caacctcctt gaccaatggc atattgagat ctatgtgaca tgaggatatt tctcagtacc
3481 actttgttac tggtacctga tgcacacgga ttgcgaccag agcatgatgc ctccatcaag
3541 tggtaatatg tttgcagcct gctgtccagc caagagtgac agatacttct agtgacttcc
3601 ccggtatcca ctctcatctt cttccaatat caagagaatc caggttctgt cagattagta
3661 aggtgtgcta atctaaattt taaaaaatct cttacaggtt ttcttgcagc tggtaccatc
3721 catgtctcac agccctggcc actgacagat cagcagatgt caccacatgg gcttctgaga
3781 aagctcttga atggggatcg ttcttaaaca tgaattcctc cctgtatgtt ttgttctttg
3841 ctttactttt caccttgcaa agagatccag tacctagtat tggaagatcc accttaacga
3901 ccgtgcatat gaaaaccaca gtctaaggaa gtgactgcag aaagctcaca gcgaccctgg
3961 cctcccctgt ggcctctttg agtgtctgca gcagccctgg acttccagac ttctatcaca
4021 tgagaaaaaa taaaactgat tattggttta agctgc
//