LOCUS AK056548 2864 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31986 fis, clone NT2RP7008720, weakly similar
to ZINC FINGER PROTEIN 84.
ACCESSION AK056548
VERSION AK056548.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2864)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2864
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7008720"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013162"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 211..2583
/codon_start=1
/protein_id="BAB71213.1"
/translation="MAYCLTNCYQYSVTFEDTAVDFTQEEWILLDPVQRNLYRDVMLE
NYENVAKVGFQLFKPSVISWLEEEELRTLQQGVLQDWAIKHQTSVSALQQEFWKIQTS
NGIQMDLVTFDSVAVEFTQEEWTLLDPAQRNLYSDVMLENYKNLSSVGYQLFKPSLIS
WLEEEEELSTLPRVLQEWKMCLKTKGPALWQDNFCLKTLNGIQLARNQNGEELYDCKQ
CEDVFCKHPCLKTNMSTQNRGNTSECIQYAKDLLSLYNKTSTIRKVSVFSKHGKSFRL
ILNVQVQRKCTQDKSFEGTDYGKAFIYQSYLEAHRKTQSGEKLNEWKQCGEAFTHSTS
HAVNVETHIIKNPYECKECGKDFRYPTHLNNHMQTHIGIKPYKCKHCGKTFTVPSGFL
EHVRTHTGEKPYGCKECGKAFGTSAGLIEHIRCHAREKTFKCDHCGKAFISYPSLFGH
LRVHNGEKPYEHKEYGKAFGTSSGIIEDRRSNTGQKRFDCDQCGKVFVSFSSLFAHLR
THTGEKPFKCYKCGKPFTSSACLRIHMRTHTEERLYQCKKCGKAFTKCSYLTKHLRTH
AGEKPYECMKCGKAFTERSYLTKHLRRHSGEKPYECKKCGKAFTERSDLTKHLRRHTG
DKPYEYKDCGKAFVVSSSLVDHLRTHTGYKPYKCNACEKAYSRSCVLTQHLKTHAAEK
TSECNACGNSFRNSMCFHDRLKTLTKIKPYKCKDCGKAFTCHSDLTNHVRIHTGEKPY
KCKECGKAFRTSSGRIQHLRTHMGEKPFECDQCGKAFASFSARIAHLKTH"
BASE COUNT 906 a 587 c 614 g 757 t
ORIGIN
1 ggtcgctggc gcctgtttcc tcagagccac tttttccttt gtgttgtctg gtcgttcact
61 actttgaggg aaaagaattt tgccgttcgc gttcgattga ctccgtcccc aagatcctgt
121 agccccacgg acctggcgac tccaccgtgt tcgggtcttt ctaggaaccc aatctgcctt
181 catgaagaaa agacagaggc agaaaggaag atggcttact gcctgacaaa ttgttatcag
241 tactccgtga cctttgagga tacagctgtg gacttcaccc aggaggagtg gattttactg
301 gacccagttc agagaaactt atacagagat gtgatgctgg agaattatga gaacgtggcc
361 aaagtaggat ttcagctctt taaacccagt gtcatctctt ggttggaaga agaagagttg
421 agaaccttgc agcaaggagt tctccaagac tgggcaataa aacatcaaac cagtgtttca
481 gcactgcagc aggagttttg gaaaatacaa acttctaatg ggatacaaat ggacctggta
541 acctttgaca gtgtggctgt ggagttcacc caggaagagt ggactttact ggacccagct
601 cagagaaacc tgtacagtga tgtgatgctg gagaactaca agaacctgtc ctcagtaggt
661 taccagctct tcaaacccag tctgatctct tggctggagg aagaggaaga gttgagcaca
721 ctgccaagag ttctccaaga atggaaaatg tgcctgaaaa ccaaagggcc agccctttgg
781 caagataatt tttgtttaaa aacattaaat gggatacagt tggcaagaaa ccaaaatgga
841 gaggaactct atgactgtaa gcaatgtgaa gatgtcttct gtaaacatcc atgccttaag
901 accaacatga gtactcaaaa tagaggcaac acgtctgaat gtattcagta tgcaaaagac
961 ctcctttctc tatacaataa aacctctacc ataaggaaag tttctgtgtt cagtaagcat
1021 ggaaaatctt tccgcctgat tttaaatgtt caggtccaga gaaagtgtac acaagataaa
1081 tcctttgaag gcactgacta tgggaaagcc ttcatttatc agtcatacct tgaagcacac
1141 aggaaaactc agagtggaga aaaactcaat gaatggaagc aatgtgggga agcatttact
1201 cactccacaa gccatgctgt aaatgttgaa acacacatta ttaaaaaccc ctatgaatgt
1261 aaggaatgtg gaaaagattt tagataccct acccacctta ataatcacat gcaaacccac
1321 attgggataa aaccttataa atgtaagcac tgtggcaaaa ccttcactgt gccgtcaggc
1381 tttcttgaac atgtacgaac tcacactgga gagaagccct atgggtgtaa ggaatgtggt
1441 aaagcctttg gtacatctgc aggccttatt gaacatataa gatgtcacgc cagagagaaa
1501 acctttaaat gtgaccactg tgggaaagcc tttatttctt acccatctct ttttggacat
1561 ttgagagttc ataatggaga gaagccatat gagcataagg aatatgggaa ggcctttggt
1621 acatcctcag gtattattga agatagaaga agtaacacag gacagaaacg ctttgattgt
1681 gaccagtgtg ggaaagtctt tgtttctttc tcatctcttt ttgctcattt gagaactcac
1741 actggtgaga agccctttaa gtgttacaaa tgtgggaaac catttacctc ttctgcctgt
1801 cttcgtattc acatgcgaac tcacacagaa gagagactct atcaatgtaa gaaatgtggt
1861 aaagctttca ctaagtgctc atatcttacc aaacatttac gaacacacgc tggagagaaa
1921 ccctatgaat gtatgaaatg tgggaaagcc ttcactgagc gctcatacct tactaaacat
1981 ttacgaagac acagtggaga gaagccatat gaatgtaaga aatgtggaaa agccttcaca
2041 gaacgctcag atcttactaa acatttacga agacacactg gagataagcc ctatgaatat
2101 aaggactgtg ggaaagcctt tgttgtctcc tccagtctag ttgatcattt aagaactcac
2161 actggatata aaccctataa atgtaatgca tgtgaaaagg cttacagtag gtcttgtgta
2221 ctaactcaac acttaaaaac tcatgcagca gagaagacct ctgaatgtaa cgcatgtgga
2281 aattcctttc gaaattccat gtgctttcat gatcgcttaa aaactctcac caaaataaaa
2341 ccctataaat gtaaggactg tgggaaagcc ttcacttgtc attcagatct tactaatcat
2401 gtgcgaattc acactggaga gaagccctat aaatgtaagg aatgtgggaa ggccttccgt
2461 acatcctcag gacgtattca acatttaaga actcatatgg gagagaaacc ctttgaatgt
2521 gaccagtgtg ggaaagcctt tgcttctttc tcagctcgta ttgcacattt gaaaacacac
2581 tagagagaag ccctgtggat gtgaagaatg tggaaaaacc tttgctgttt cctcaagcct
2641 aactgaacat gtaaaaattc acaggagaaa gtaacactat caatgtaagg aatgtgagaa
2701 agcctgaaca gttgaatctt tctagatatg tacaaactca cactgtagag aaaccctgta
2761 aatgtaaggg atgtaggaaa acactagttc ttctctctct cttttttttt tttgatgagt
2821 ctcgctctgc actccagcct ggcgactgag tgagactcca tctc
//