LOCUS AK056525 3310 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31963 fis, clone NT2RP7007610, highly similar
to Homo sapiens DDHD domain containing 2 (DDHD2), mRNA.
ACCESSION AK056525
VERSION AK056525.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3310)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3310
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007610"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013139"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 280..2415
/codon_start=1
/note="highly similar to Homo sapiens DDHD domain
containing 2 (DDHD2), mRNA"
/protein_id="BAG51738.1"
/translation="MSSVQSQQEQLSQSDPSPSPNSCSSFELIDMDAGSLYEPVSPHW
FYCKIIDSKETWIPFNSEDSQQLEEAYSSGKGCNGRVVPTDGGRYDVHLGERMRYAVY
WDELASEVRRCTWFYKGDKDNKYVPYSESSSQVLEETYMLAVTLDEWKKKLESPNREI
IILHNPKLMVHYQPVAGSDGWGSTPTEQGRPRTVKRGVENISVDIHCGEPLQIDHLVF
VVHGIGPACDLRFRSIVQCVNDFRSVSLNLLQTHFKKAQENQQIGRVEFLPVNWHSPL
HSTGVDVDLQRITLPSINRLRHFTNDTILDVFFYNSPTYCQTIVDTVASEMNRIYTLF
LQRNPDFKGGVSIAGHSLGSLILFDILTNQKDSLGDIDSEKDSLNIVMYQGDTPTLEE
DLKKLQLSEFFDIFEKEKVDKEALALCTDRDLQEIGIPLGPRKKILNYFSTRKNSMGI
KRPAPQPASGANIPKESEFCSSSNTRNGDYLDVGIGQVSVKYPRLIYKPEIFFAFGSP
IGMFLTVRGLKRIDPNYRFPTCKGFFNIYHPFDPVAYRIEPMVVPGVEFEPMLIPHHK
GRKRMHLELREGLTRMSMDLKNNLLGSLRMAWKSFTRAPYPALQASETPEETEAEPES
TSEKPSDVNTEETSVAVKEEVLPINVGMLNGGQRIDYVLQEKPIESFNEYLFALQSHL
CYWESEDTVLLVLKEIYQTQGIFLDQPLQ"
BASE COUNT 888 a 688 c 786 g 948 t
ORIGIN
1 cacttgccgc ccgtgccctg cggccctgca cgccccaccc gcggtcgcgc gccgcgctcc
61 ccgccgcctc accttttcgc ctggcatccg ggcccgctac tcgcccactg ggagcgccgt
121 ggcgcctggt gttcggcgcg agcccggcgg ggctgcaggt tccgccctgc tccgccgcgc
181 cccgcccggg ctggggtaaa ggccgcggcc gggccatgca gtgtcctcct cagggagggc
241 aggagagcct gaggagtggc ggggccgcca gagagcgaaa tgtcatcagt gcagtcacaa
301 caggagcagt tgtcccagtc agatccatct ccgtcaccaa actcatgtag ttcctttgag
361 ctaatagaca tggatgctgg cagcttgtat gaaccagttt ctccccattg gttttattgt
421 aagataatag attctaagga gacatggatt cctttcaact ctgaggattc acagcagctg
481 gaagaggcat atagctctgg aaaaggttgt aatgggagag ttgttcctac tgatgggggc
541 agatatgatg ttcatttggg ggagaggatg cggtatgctg tatactggga tgaactggca
601 tcggaagtga gacgatgtac gtggttttac aagggggaca aagacaataa gtatgttccc
661 tactcggaga gctccagcca agttttagag gaaacttaca tgcttgctgt aactttggat
721 gaatggaaaa agaaactgga atctcccaac agagaaatta ttattttaca caatccaaag
781 cttatggtgc attaccagcc agttgcaggg tctgatggtt ggggttcaac acccacggag
841 cagggtcgac caagaactgt gaagagagga gttgagaaca tctctgttga cattcattgt
901 ggagaacctt tacaaataga tcacttggtt tttgtagtcc atgggattgg accagcttgt
961 gatctccgct ttcgaagcat tgtacagtgt gttaatgatt ttcgcagtgt ttccttgaac
1021 ttgctacaga cacattttaa gaaagcccaa gaaaatcagc agattgggag ggtagaattt
1081 cttccagtca actggcacag tcctttgcat tctactggtg tggatgtaga tctgcagcga
1141 ataaccctgc ccagcattaa ccgcctcagg cacttcacca atgacacaat tctggatgtc
1201 ttcttctaca atagtcccac ctactgtcag actattgtgg acacagttgc ttctgaaatg
1261 aaccgaatat acacactttt tctacagagg aaccctgatt tcaaaggggg tgtatccatt
1321 gctggtcata gtttaggttc gcttatattg tttgatatcc taacaaatca gaaagattct
1381 ttgggggata ttgacagtga aaaggattcg ctaaatattg taatgtatca aggagataca
1441 cctacactag aggaagattt gaagaaactt cagctctctg aattctttga tatctttgag
1501 aaggagaaag tagataagga agctctggct ttatgtacag accgagatct tcaggaaata
1561 ggaattcctt taggaccaag aaagaagata ttaaactatt tcagcaccag aaaaaactca
1621 atgggtatta agagaccagc cccgcagcct gcttcagggg caaacatccc caaagaatct
1681 gagttctgca gtagcagtaa tactagaaat ggtgactatc tggatgttgg cattgggcag
1741 gtgtctgtga aatacccccg gctcatctat aaaccagaga tattctttgc ctttggatct
1801 cccattggaa tgttccttac tgtccgagga ctaaaaagaa ttgatcccaa ctacagattt
1861 ccaacgtgca aaggtttctt caatatttat cacccttttg atcctgtggc ctataggatt
1921 gaaccaatgg tggtcccagg agtggaattt gagccaatgc tgatcccaca tcataaaggc
1981 aggaagcgga tgcacttaga actgagagag ggcttgacca ggatgagtat ggaccttaag
2041 aacaacttgc taggttcgct gcggatggcc tggaagtctt ttaccagagc tccataccct
2101 gccttacaag cttcagaaac accagaagaa actgaagcag aacctgaatc aacttcagag
2161 aagcctagtg atgttaacac agaagagacc tctgtggcag ttaaagaaga agtcctgcct
2221 atcaatgtgg ggatgctgaa tggaggccaa cgcattgact atgtgctaca ggagaagcct
2281 attgaaagtt ttaatgagta tttatttgct ttacaaagcc atctatgcta ctgggagtct
2341 gaagatacag tattgctcgt cctcaaagag atctaccaaa cccagggtat cttccttgat
2401 cagcctttac agtaaaaatg acccatctat ggctgcttaa tacggacatt gagggatcct
2461 tccccagaaa atccacctgt ttgttgctgc aattttcctc tcctcagctg cgtcatttcc
2521 tgcatgttgc ctgccactta ctcaccactg gggtctttgg aagataatct tcctctttgg
2581 aaatgaatgg aaaagcaaaa ggccctatta cttttaacca ctggcttcat ataaacactt
2641 gccatttttt tctgcatagc tgggggtggt ttgtgtcttt aattctttga tgatagttta
2701 tagttgccac actttattga ttagtacttg acagggtgta aagcctattt tgggtttgat
2761 ttgttttggg tggggtagac atgtttttaa ggaacttatt gcttatcttt agaaaatgtt
2821 ctagtttgga aacagattct tgagattcag aaggcatttt ggagtacact tatctcttgt
2881 ttgtgttgaa ctgaaggcta agtctcagtg gacatggaaa agacttttgg gtgatttatt
2941 tttgaacctg catttctttc ttatgtgtag tgtatgaaga aagactagaa tgtagcttta
3001 aaaaagtgtt gtttactctc ttagaactga cagacttatt gccagaaatc actgatgttc
3061 attgtttttg caactgtttg agctgctgta agagtctaaa gttgacaagt tagttcatgt
3121 taggtgcatc tttataaagc aaagatgttg tatatcctag gcctcccttt tatatttgat
3181 agaagttatt tgctaatagc ttctattctt acgttgaaaa tagttgtaaa agctgatgaa
3241 cctgaaattg tgtagcctct acaggctgct gaggttctaa ataaaacctt ttagtggtgc
3301 ctttatggtg
//