LOCUS AK056514 3059 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ31952 fis, clone NT2RP7007221, weakly similar
to Rattus norvegicus schlafen-4 (SLFN-4) mRNA.
ACCESSION AK056514
VERSION AK056514.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3059)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3059
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7007221"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013128"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 205..1944
/codon_start=1
/protein_id="BAB71201.1"
/translation="MEANHCSLAPKSWMVREKYIRPLTTEEWVEKMMDADPEFPPDFA
EAFESQLSLSDSPSLCRPVYSKKGLEHKADLQQHLFPVPPGHLECTPESLWKELSLQH
EGLKELIHKQMRPFSQGIVILSRSWAVDLNLQEKPGVICDALLIAQNSTPILYTILRE
QDAEGQDYCTRTAFTLKQKLVNMGGYTGKVCVRAKVLCLSPESSAEALEAAVSPMDYP
ASYSLAGTQHMEALLQSLVIVLLGFRSLLSDQLGCEVLNLLTAQQYEIFSRSLRKNRE
LFVHGLPGSGKTIMAMKIMEKIRNVFHCEAHRILYVCENQPLRNFISDRNICRAETRE
TFLREKFEHIQHIVIDEAQNFRTEDGDWYRKAKTITQREKDCPGVLWIFLDYFQTSHL
GHSGLPPLSAQYPREELTRVVRNADEIAEYIQQEMQLIIENPPINIPHGYLAILSEAK
WVPGVPGNTKIIKNFTLEQIVTYVADTCRCFFERGYSPKDVAVLVSTVTEVEQYQSKL
LKAMRKKMVVQLSDACDMLGVHIVLDSVRRFSGLERSIVFGIHPRTADPAILPNILIC
LASRAKQHLYIFL"
BASE COUNT 856 a 658 c 751 g 794 t
ORIGIN
1 aaaacgcgga gtgtcctgga gcttgacgcg ctggagcttg agaggtcttt caggactgat
61 tttggtggaa gaagacagca ggcggtgggc attcactgtg ctggtgggaa gtctggttac
121 attaagaaag gaattctagc aaagttattc tgtaaataca acagaatcag ttgcttttgt
181 taaatatatt ggtgcaagtt caacatggag gcaaatcact gctccctggc tcccaagtca
241 tggatggtga gggagaagta catccgcccc ttgacaactg aggaatgggt agagaaaatg
301 atggacgcag atccagagtt tcctccagac tttgctgagg cctttgagtc tcagttgagt
361 ctatctgaca gtccttcact ttgcagacca gtgtattcta agaaaggtct ggaacacaaa
421 gctgatctac aacaacattt atttccagtt ccaccaggac atttggaatg tactccagag
481 tccctctgga aggagctgtc tttacagcat gaaggactaa aggagttaat acacaagcaa
541 atgcgacctt tctcccaggg aattgtgatc ctctctagaa gctgggctgt ggacctgaac
601 ttgcaggaga agccaggagt catctgtgat gctctgctga tagcacagaa cagcaccccc
661 attctctaca ccattctcag ggagcaggat gcagagggcc aggactactg cactcgcacc
721 gcctttactt tgaagcagaa gctagtgaac atggggggct acaccgggaa ggtgtgtgtc
781 agggccaagg tcctctgcct gagtcctgag agcagcgcag aggccttgga ggctgcagtg
841 tctccgatgg attaccctgc gtcctatagc cttgcaggca cccagcacat ggaagccctg
901 ctgcagtccc tcgtgattgt cttactcggc ttcaggtctc tcttgagtga ccagctcggc
961 tgtgaggttt taaatctgct cacagcccag cagtatgaga tattctccag aagcctccgc
1021 aagaacagag agttgtttgt ccacggctta cctggctcag ggaagaccat catggccatg
1081 aagatcatgg agaagatcag gaatgtgttt cactgtgagg cacacagaat tctctacgtt
1141 tgtgaaaacc agcctctgag gaactttatc agtgatagaa atatctgccg agcagagacc
1201 cgggaaactt tcctaagaga aaaatttgaa cacattcaac acatcgtcat tgacgaagct
1261 cagaatttcc gtactgaaga tggggactgg tataggaagg caaaaaccat cactcagaga
1321 gaaaaggatt gtccaggagt tctctggatc tttctggact actttcagac cagtcacttg
1381 ggtcacagtg gccttccccc tctctcagca cagtatccaa gagaagagct caccagagta
1441 gttcgcaatg cagatgaaat agccgagtac atacaacaag aaatgcaact aattatagaa
1501 aatcctccaa ttaatatccc ccatgggtat ctggcaattc tcagtgaagc taaatgggtt
1561 ccaggtgttc caggcaacac aaagattatt aaaaacttta ctttggagca aatagtgacc
1621 tatgtggcag acacctgcag gtgcttcttt gaaaggggct attctccaaa ggatgttgct
1681 gtgcttgtca gcaccgtgac agaagtggag cagtatcagt ctaagctctt gaaagcaatg
1741 aggaagaaaa tggtggtgca gctcagtgat gcatgtgata tgttgggtgt gcacattgtg
1801 ttggacagtg tccggcgatt ctcaggcctg gaaaggagca tagtgtttgg gatccatcca
1861 aggacagctg acccagctat cttacccaat attctgatct gtctggcttc cagggcaaaa
1921 cagcacctat atatttttct gtgaagtgac tattaggaag aactccaaac caaaatactg
1981 tgtaaatgtc tatgggtgac agtctgctga tggtagaaac ctttcttttt agttcacaag
2041 tcagttagag atttggacag agctgacaca aagagtttgg agctccccca tttctggctc
2101 tcctttcagg ggttcctccc ccaactcttt tcagcagtgg tggctgcccc ccattctgac
2161 ccctgactct tgcagccaga aagatggtgg ttttctaaag gaactttagc ttgctgcaca
2221 atgcagacct gtgtcttgct ctctgggtaa aagccataaa aataagaaac tcagcctgtg
2281 gcctttcttc caaggctgga gttctcgagt tcttttatgt gacttcgtgt agtttgttgc
2341 tttaaaaaat ttgtccagaa ttgttttctg cagaagcatg gtctgttagg agcttacagg
2401 ccataggaga agcagttgtt tcctgaattt atctttgctg tattcattta gggcttggga
2461 gagtcccaag ataattcagt cactgtcaga ttaatcattt cggcagaaca aacaatattg
2521 ttatgattat ttaatcctta aaattgtgat ctccagagtt tgttatcaga ataacccaga
2581 ccaaggctta attgtaatag tgaacattaa tggtaccttt acagagaaat tataggccaa
2641 gagaaaatgc tggctttcag tagaagttaa tattagaaac ccaaatctgg ttctgaaagt
2701 gtgtatcaga tgtacggtga acaaacttgg gaaagattct ctttaaaaat caatgagcgt
2761 tggccaggca cggtggctca cacctgtaat cccagctgtt tgggaggctg aggcaggtgg
2821 atcacctgag gtcaggagtt caagaccagc ttggccaaca tggagaaacc ccatctctac
2881 taaaaataca aaaattagca gggcatggtg gtgcatgcct gtatcccagc tacttgggag
2941 gctgaagcat gagaatcact tgaatcctgg aggcagaggt tgcagtgagc tgagatcatg
3001 tcactgtact ccagcctggg caacagagtg agactgtctc aaaaaaaaaa aaaaaaaag
//