LOCUS AK056464 3033 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ31902 fis, clone NT2RP7004233, highly similar
to Tetratricopeptide repeat protein 7A.
ACCESSION AK056464
VERSION AK056464.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3033)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..3033
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7004233"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000013078"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 434..2908
/codon_start=1
/note="highly similar to Tetratricopeptide repeat protein
7A"
/protein_id="BAG51719.1"
/translation="MVPSSSRTPGFKQSSHHLRLPKCWDYRDDFGKLLLAEALLEQCL
KENHAKINDSMPLLEKNEPKMSEAKNYLSSILNHGRLSPQYMCEAMLILGKLHYVEGS
YRDAISMYARAGIDDMSMENKPLYQMRLLSEAFVIKGLSLERLPNSIASRFRLTEREE
EVITCFERASWIAQVFLQELEKTTNNSTSRHLKGCHPLDYELTYFLEAALQSAYVKNL
KKGNIVKGMRELREVLRTVETKATQNFKVMAAKHLAGVLLHSLSEECYWSPLSHPLPE
FMGKEESSFATQALRKPHLYEGDNLYCPKDNIEEALLLLLISESMATRDVVLSRVPEQ
EEDRTVSLQNAAAIYDLLSITLGRRGQYVMLSECLERAMKFAFGEFHLWYQVALSMVA
CGKSAYAVSLLRECVKLRPSDPTVPLMAAKVCIGSLRWLEEAEHFAMMVISLGEEAGE
FLPKGYLALGLTYSLQATDATLKSKQDELHRKALQTLERAQQLAPSDPQVILYVSLQL
ALVRQISSAMEQLQEALKVRKDDAHALHLLALLFSAQKHHQHALDVVNMAITEHPENF
NLMFTKVKLEQVLKGPEEALVTCRQVLRLWQTLYSFSQLGGLEKDGSFGEGLTMKKQS
GMHLTLPDAHDADSGSRRASSIAASRLEEAMSELTMPSSVLKQGPMQLWTTLGQIWLQ
AAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTV
NPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAA
VDCFLTALELEASSPVLPFSIIPREL"
BASE COUNT 678 a 870 c 886 g 599 t
ORIGIN
1 ctcctataca gggctcttgg ttcaggtctc ttggttcgtc ctgctgcaag ttgggaagaa
61 agataatagg aatgctaatt ccttcttgat gaaacgacca caacacgctg gagccggcct
121 tggaccctac gtttcaagat tggcctgctt ccagcgtctg ccagctccac tgcacaagct
181 gcggcagccg ctgtccccgt tcgcttccac gggagtccca gcaagactat gcgacccagt
241 tcaaatacca tcttccatgt accgttcgtg aaatcagcag cttttgacat tcaagagagg
301 acagattact taaaaacaga ctcatgaaca aatagggaaa cgaatacatc atccctgtat
361 cgaattcatc cctgtataat cctgccctta cacctgtgct cctatacaag attaacattc
421 aaaaagagtc tccatggtgc ccagctcgtc tcgaactcct gggttcaagc aatcctccca
481 ccacctccgc ctcccaaagt gctgggatta cagggatgac tttgggaaat tgctgctggc
541 tgaggccctc ctggagcagt gtttgaagga gaaccatgcc aaaataaacg actccatgcc
601 tttgctggag aagaatgagc cgaagatgag cgaagccaaa aattatctaa gcagtatcct
661 taaccatggg aggctctcgc cacagtacat gtgtgaggcc atgctgatcc tgggcaaact
721 gcattacgtg gagggctcat accgagatgc catcagcatg tacgcacggg ccgggattga
781 tgacatgtcc atggagaaca agcccctgta tcagatgcgg ctgctgtcgg aggcttttgt
841 catcaaaggc ctctctctgg aacgcctacc caactccatc gcctcccgct tccgcctgac
901 agagagggag gaggaagtga tcacctgttt tgagagggcc tcctggatcg ctcaggtgtt
961 cctgcaggaa ttggagaaga ccacaaataa cagcacgtcg aggcatctga aaggctgtca
1021 cccgcttgac tatgagctca cctacttcct ggaagctgcc ctccagagcg cctatgtgaa
1081 aaacctgaag aaggggaaca tcgtgaaggg catgagagag ctccgggagg tgctgcggac
1141 tgtggagacc aaagcaactc agaacttcaa agtgatggcg gccaagcacc tggcgggggt
1201 cctgctgcac tccctgagtg aggagtgcta ctggagcccc ctgtcccacc ctctgcctga
1261 gttcatgggc aaggaggaga gttctttcgc cactcaggcc ctgcggaaac ctcacctcta
1321 tgaaggagac aacctctact gccccaagga caacatcgag gaagccctcc tgctcctcct
1381 catcagcgaa tccatggcaa ctcgagatgt ggtgctgagc cgggtgccgg agcaggagga
1441 ggaccggaca gtgagcttgc agaatgccgc agccatctat gacctcctga gcatcacgtt
1501 gggcagaagg ggacagtacg tcatgctctc ggagtgcctg gagcgagcca tgaagtttgc
1561 gtttggagaa tttcaccttt ggtaccaggt ggccctctcc atggtggctt gtgggaagtc
1621 agcctacgct gtgtccctgc tgcgggagtg tgtgaagttg cggccctcgg accccaccgt
1681 gcccctgatg gccgcgaagg tctgcatcgg gtcccttcgc tggctagagg aagcagagca
1741 ctttgccatg atggtgatca gcctcggaga ggaagccggg gagttcctcc ccaagggcta
1801 cctggctctg ggtctcacct atagcctgca ggccaccgac gccaccctga agtccaagca
1861 agatgaattg caccggaagg cactgcagac gctggagagg gctcagcagc tggcgcccag
1921 tgacccccag gtcatcctct atgtctcgct gcagctggcc ctcgtccgac agatctccag
1981 tgccatggag cagctgcagg aggccctgaa ggtacgcaag gatgatgccc acgccctcca
2041 cctgctggca ctgctcttct ctgcccagaa gcaccaccag catgccctgg atgttgtcaa
2101 catggccatc accgagcacc ctgagaactt caacctgatg ttcaccaagg tgaagctgga
2161 gcaggtgctg aaaggcccag aggaagccct cgtgacctgc agacaagtgc tgaggctgtg
2221 gcagaccctg tacagcttct cccagctggg aggcctagaa aaggatggca gcttcggtga
2281 gggcctcacc atgaagaagc agagtggcat gcacctgact ttgcctgatg cccatgatgc
2341 agactctggc tcccggcggg cttcgtccat cgccgcctcc cggctggagg aggccatgtc
2401 agagctgact atgccctctt cggtcctgaa gcagggcccc atgcagctgt ggaccacgct
2461 gggacagatc tggctgcagg ctgctgagct gttcatggaa cagcagcacc tcaaggaagc
2521 aggtttctgc atccaggagg cggcgggcct cttccccact tctcactcag tactctatat
2581 gcggggccgg ctggctgagg tgaagggcaa cctggaggag gccaagcagc tgtacaagga
2641 ggcgctcacg gtgaacccag atggcgtgcg catcatgcat agcctgggtc tgatgctgag
2701 tcggctgggc cacaagagct tggcccagaa ggtgcttcgt gatgccgtgg agaggcagag
2761 tacgtgccac gaggcgtggc agggcctggg cgaggtgctg caggcccagg gccagaacga
2821 ggctgccgtt gactgcttcc tcaccgccct tgagctggag gccagcagcc ctgtactgcc
2881 cttctccatc atccccagag agctctgacg acgctgcagc cgcagggagg gaggggctgg
2941 ccagagggag aggcagcagg gaacgtgggt cagggtgggg caacagtggc atcaggtgcg
3001 gggcctcagg gaaatacatc tttagtgaac gcc
//